This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5yi2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:30, 22 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5yi2' size='340' side='right'caption='[[5yi2]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
<StructureSection load='5yi2' size='340' side='right'caption='[[5yi2]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5yi2]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Lacla Lacla]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YI2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5YI2 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5yi2]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactococcus_lactis Lactococcus lactis] and [https://en.wikipedia.org/wiki/Lactococcus_lactis_subsp._lactis_Il1403 Lactococcus lactis subsp. lactis Il1403]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YI2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5YI2 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5yhy|5yhy]], [[5yhx|5yhx]], [[5yhz|5yhz]], [[5yi1|5yi1]], [[5yi0|5yi0]], [[5yi3|5yi3]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">zitR, L168265 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272623 LACLA])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5yi2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5yi2 OCA], [https://pdbe.org/5yi2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5yi2 RCSB], [https://www.ebi.ac.uk/pdbsum/5yi2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5yi2 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5yi2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5yi2 OCA], [http://pdbe.org/5yi2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5yi2 RCSB], [http://www.ebi.ac.uk/pdbsum/5yi2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5yi2 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9CDU5_LACLA Q9CDU5_LACLA]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 19:
</div>
</div>
<div class="pdbe-citations 5yi2" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5yi2" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Lacla]]
+
[[Category: Lactococcus lactis]]
 +
[[Category: Lactococcus lactis subsp. lactis Il1403]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Chen, P]]
+
[[Category: Chen P]]
-
[[Category: Liu, H]]
+
[[Category: Liu H]]
-
[[Category: Song, Y]]
+
[[Category: Song Y]]
-
[[Category: Yi, C]]
+
[[Category: Yi C]]
-
[[Category: Zhu, R]]
+
[[Category: Zhu R]]
-
[[Category: Marr family]]
+
-
[[Category: Metal binding protein]]
+
-
[[Category: Transcriptional regulator]]
+
-
[[Category: Winged helix-turn-helix]]
+
-
[[Category: Zinc binding protein]]
+

Current revision

Structure of Lactococcus lactis ZitR, wild type in complex with DNA

PDB ID 5yi2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5yi2"
Personal tools