This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3epw
From Proteopedia
(Difference between revisions)
| (One intermediate revision not shown.) | |||
| Line 3: | Line 3: | ||
<StructureSection load='3epw' size='340' side='right'caption='[[3epw]], [[Resolution|resolution]] 1.30Å' scene=''> | <StructureSection load='3epw' size='340' side='right'caption='[[3epw]], [[Resolution|resolution]] 1.30Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3epw]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3epw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trypanosoma_vivax Trypanosoma vivax]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EPW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EPW FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=JMQ:7-(((2R,3R,4S)-3,4-DIHYDROXY-2-(HYDROXYMETHYL)PYRROLIDIN-1-YL)METHYL)-3H-PYRROLO[3,2-D]PYRIMIDIN-4(5H)-ONE'>JMQ</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=JMQ:7-(((2R,3R,4S)-3,4-DIHYDROXY-2-(HYDROXYMETHYL)PYRROLIDIN-1-YL)METHYL)-3H-PYRROLO[3,2-D]PYRIMIDIN-4(5H)-ONE'>JMQ</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3epw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3epw OCA], [https://pdbe.org/3epw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3epw RCSB], [https://www.ebi.ac.uk/pdbsum/3epw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3epw ProSAT]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q9GPQ4_TRYVI Q9GPQ4_TRYVI] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 32: | Line 33: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Duttonella vivax]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: | + | [[Category: Trypanosoma vivax]] |
| - | [[Category: Augustyns | + | [[Category: Augustyns K]] |
| - | [[Category: Berg | + | [[Category: Berg M]] |
| - | [[Category: Goeminne | + | [[Category: Goeminne A]] |
| - | [[Category: Haemers | + | [[Category: Haemers A]] |
| - | [[Category: Steyaert | + | [[Category: Steyaert J]] |
| - | [[Category: Vandemeulebroucke | + | [[Category: Vandemeulebroucke A]] |
| - | [[Category: Versees | + | [[Category: Versees W]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of Trypanosoma vivax nucleoside hydrolase in complex with the inhibitor (2R,3R,4S)-1-[(4-hydroxy-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-2-(hydroxymethyl)pyrrolidin-3,4-diol
| |||||||||||

