6l7p

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'''Unreleased structure'''
 
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The entry 6l7p is ON HOLD until Paper Publication
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==cryo-EM structure of cyanobacteria NDH-1LdelV complex==
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<SX load='6l7p' size='340' side='right' viewer='molstar' caption='[[6l7p]], [[Resolution|resolution]] 3.60&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6l7p]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermosynechococcus_vestitus_BP-1 Thermosynechococcus vestitus BP-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6L7P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6L7P FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.6&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AJP:Digitonin'>AJP</scene>, <scene name='pdbligand=BCR:BETA-CAROTENE'>BCR</scene>, <scene name='pdbligand=DGD:DIGALACTOSYL+DIACYL+GLYCEROL+(DGDG)'>DGD</scene>, <scene name='pdbligand=LHG:1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE'>LHG</scene>, <scene name='pdbligand=PQN:PHYLLOQUINONE'>PQN</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene>, <scene name='pdbligand=SQD:1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL'>SQD</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6l7p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6l7p OCA], [https://pdbe.org/6l7p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6l7p RCSB], [https://www.ebi.ac.uk/pdbsum/6l7p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6l7p ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q8DL29_THEVB Q8DL29_THEVB] NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.[HAMAP-Rule:MF_01456]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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NDH-1 is a key component of the cyclic-electron-transfer around photosystem I (PSI CET) pathway, an important antioxidant mechanism for efficient photosynthesis. Here, we report a 3.2-A-resolution cryo-EM structure of the ferredoxin (Fd)-NDH-1L complex from the cyanobacterium Thermosynechococcus elongatus. The structure reveals three beta-carotene and fifteen lipid molecules in the membrane arm of NDH-1L. Regulatory oxygenic photosynthesis-specific (OPS) subunits NdhV, NdhS and NdhO are close to the Fd-binding site whilst NdhL is adjacent to the plastoquinone (PQ) cavity, and they play different roles in PSI CET under high-light stress. NdhV assists in the binding of Fd to NDH-1L and accelerates PSI CET in response to short-term high-light exposure. In contrast, prolonged high-light irradiation switches on the expression and assembly of the NDH-1MS complex, which likely contains no NdhO to further accelerate PSI CET and reduce ROS production. We propose that this hierarchical mechanism is necessary for the survival of cyanobacteria in an aerobic environment.
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Authors: Zhang, C., Shuai, J., Wu, J., Lei, M.
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Structural insights into NDH-1 mediated cyclic electron transfer.,Zhang C, Shuai J, Ran Z, Zhao J, Wu Z, Liao R, Wu J, Ma W, Lei M Nat Commun. 2020 Feb 14;11(1):888. doi: 10.1038/s41467-020-14732-z. PMID:32060291<ref>PMID:32060291</ref>
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Description: cryo-EM structure of cyanobacteria NDH-1LdelV complex
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Lei, M]]
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<div class="pdbe-citations 6l7p" style="background-color:#fffaf0;"></div>
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[[Category: Wu, J]]
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[[Category: Zhang, C]]
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==See Also==
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[[Category: Shuai, J]]
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*[[NADH-quinone oxidoreductase|NADH-quinone oxidoreductase]]
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== References ==
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<references/>
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__TOC__
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</SX>
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[[Category: Large Structures]]
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[[Category: Thermosynechococcus vestitus BP-1]]
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[[Category: Lei M]]
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[[Category: Shuai J]]
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[[Category: Wu J]]
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[[Category: Zhang C]]

Current revision

cryo-EM structure of cyanobacteria NDH-1LdelV complex

6l7p, resolution 3.60Å

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