This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4xtc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:31, 8 November 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='4xtc' size='340' side='right'caption='[[4xtc]], [[Resolution|resolution]] 3.60&Aring;' scene=''>
<StructureSection load='4xtc' size='340' side='right'caption='[[4xtc]], [[Resolution|resolution]] 3.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4xtc]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Sphingomonas_sp._a1 Sphingomonas sp. a1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XTC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4XTC FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4xtc]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Sphingomonas_sp._A1 Sphingomonas sp. A1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4XTC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4XTC FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BEM:BETA-D-MANNURONIC+ACID'>BEM</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.6&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">algM1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=90322 Sphingomonas sp. A1]), algM2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=90322 Sphingomonas sp. A1]), algS ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=90322 Sphingomonas sp. A1]), algQ2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=90322 Sphingomonas sp. A1])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BEM:BETA-D-MANNURONIC+ACID'>BEM</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4xtc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xtc OCA], [http://pdbe.org/4xtc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4xtc RCSB], [http://www.ebi.ac.uk/pdbsum/4xtc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4xtc ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4xtc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4xtc OCA], [https://pdbe.org/4xtc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4xtc RCSB], [https://www.ebi.ac.uk/pdbsum/4xtc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4xtc ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9KWT8_SPHSX Q9KWT8_SPHSX]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 24:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Sphingomonas sp. a1]]
+
[[Category: Sphingomonas sp. A1]]
-
[[Category: Baba, S]]
+
[[Category: Baba S]]
-
[[Category: Hashimoto, W]]
+
[[Category: Hashimoto W]]
-
[[Category: Kaneko, A]]
+
[[Category: Kaneko A]]
-
[[Category: Kumasaka, T]]
+
[[Category: Kumasaka T]]
-
[[Category: Maruyama, Y]]
+
[[Category: Maruyama Y]]
-
[[Category: Mikami, B]]
+
[[Category: Mikami B]]
-
[[Category: Mizuno, N]]
+
[[Category: Mizuno N]]
-
[[Category: Murata, K]]
+
[[Category: Murata K]]
-
[[Category: Abc]]
+
-
[[Category: Alginate]]
+
-
[[Category: Sphingomona]]
+
-
[[Category: Transport protein]]
+
-
[[Category: Transporter]]
+

Current revision

Crystal structure of bacterial alginate ABC transporter in complex with alginate pentasaccharide-bound periplasmic protein

PDB ID 4xtc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools