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| <StructureSection load='6awl' size='340' side='right'caption='[[6awl]], [[Resolution|resolution]] 2.00Å' scene=''> | | <StructureSection load='6awl' size='340' side='right'caption='[[6awl]], [[Resolution|resolution]] 2.00Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[6awl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6AWL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6AWL FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6awl]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6AWL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6AWL FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BTB:2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>BTB</scene>, <scene name='pdbligand=PEF:DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE'>PEF</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">COQ9, C16orf49, HSPC326, PSEC0129 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BTB:2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>BTB</scene>, <scene name='pdbligand=PEF:DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE'>PEF</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6awl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6awl OCA], [http://pdbe.org/6awl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6awl RCSB], [http://www.ebi.ac.uk/pdbsum/6awl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6awl ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6awl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6awl OCA], [https://pdbe.org/6awl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6awl RCSB], [https://www.ebi.ac.uk/pdbsum/6awl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6awl ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/COQ9_HUMAN COQ9_HUMAN] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Human]] | + | [[Category: Homo sapiens]] |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Bingman, C A]] | + | [[Category: Bingman CA]] |
- | [[Category: Lohman, D C]] | + | [[Category: Lohman DC]] |
- | [[Category: MPP, Mitochondrial Protein Partnership]]
| + | [[Category: Pagliarini DJ]] |
- | [[Category: Pagliarini, D J]] | + | [[Category: Smith RW]] |
- | [[Category: Smith, R W]] | + | |
- | [[Category: Biosynthetic protein]]
| + | |
- | [[Category: Coenzyme q biosynthesis]]
| + | |
- | [[Category: Lipid binding]]
| + | |
- | [[Category: Mitochondrial protein partnership]]
| + | |
- | [[Category: Mpp]]
| + | |
- | [[Category: PSI, Protein structure initiative]]
| + | |
- | [[Category: Structural genomic]]
| + | |
- | [[Category: Tetr family]]
| + | |
| Structural highlights
Function
COQ9_HUMAN
Publication Abstract from PubMed
The biosynthesis of coenzyme Q presents a paradigm for how cells surmount hydrophobic barriers in lipid biology. In eukaryotes, CoQ precursors-among nature's most hydrophobic molecules-must somehow be presented to a series of enzymes peripherally associated with the mitochondrial inner membrane. Here, we reveal that this process relies on custom lipid-binding properties of COQ9. We show that COQ9 repurposes the bacterial TetR fold to bind aromatic isoprenes with high specificity, including CoQ intermediates that likely reside entirely within the bilayer. We reveal a process by which COQ9 associates with cardiolipin-rich membranes and warps the membrane surface to access this cargo. Finally, we identify a molecular interface between COQ9 and the hydroxylase COQ7, motivating a model whereby COQ9 presents intermediates directly to CoQ enzymes. Overall, our results provide a mechanism for how a lipid-binding protein might access, select, and deliver specific cargo from a membrane to promote biosynthesis.
An Isoprene Lipid-Binding Protein Promotes Eukaryotic Coenzyme Q Biosynthesis.,Lohman DC, Aydin D, Von Bank HC, Smith RW, Linke V, Weisenhorn E, McDevitt MT, Hutchins P, Wilkerson EM, Wancewicz B, Russell J, Stefely MS, Beebe ET, Jochem A, Coon JJ, Bingman CA, Dal Peraro M, Pagliarini DJ Mol Cell. 2019 Jan 15. pii: S1097-2765(18)31003-7. doi:, 10.1016/j.molcel.2018.11.033. PMID:30661980[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Lohman DC, Aydin D, Von Bank HC, Smith RW, Linke V, Weisenhorn E, McDevitt MT, Hutchins P, Wilkerson EM, Wancewicz B, Russell J, Stefely MS, Beebe ET, Jochem A, Coon JJ, Bingman CA, Dal Peraro M, Pagliarini DJ. An Isoprene Lipid-Binding Protein Promotes Eukaryotic Coenzyme Q Biosynthesis. Mol Cell. 2019 Jan 15. pii: S1097-2765(18)31003-7. doi:, 10.1016/j.molcel.2018.11.033. PMID:30661980 doi:http://dx.doi.org/10.1016/j.molcel.2018.11.033
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