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| <StructureSection load='6m7l' size='340' side='right'caption='[[6m7l]], [[Resolution|resolution]] 2.65Å' scene=''> | | <StructureSection load='6m7l' size='340' side='right'caption='[[6m7l]], [[Resolution|resolution]] 2.65Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[6m7l]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/'actinomadura_parvosata_subsp._kistnae' 'actinomadura parvosata subsp. kistnae']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6M7L OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6M7L FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6m7l]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Actinomadura_parvosata_subsp._kistnae Actinomadura parvosata subsp. kistnae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6M7L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6M7L FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.648297Å</td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">KIS93_04814 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1955414 'Actinomadura parvosata subsp. kistnae']), KIS93_04812 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1955414 'Actinomadura parvosata subsp. kistnae'])</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6m7l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6m7l OCA], [http://pdbe.org/6m7l PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6m7l RCSB], [http://www.ebi.ac.uk/pdbsum/6m7l PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6m7l ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6m7l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6m7l OCA], [https://pdbe.org/6m7l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6m7l RCSB], [https://www.ebi.ac.uk/pdbsum/6m7l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6m7l ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/A0A2P9IBG7_9ACTN A0A2P9IBG7_9ACTN] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| [[Category: Actinomadura parvosata subsp. kistnae]] | | [[Category: Actinomadura parvosata subsp. kistnae]] |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Adamek, M]] | + | [[Category: Adamek M]] |
- | [[Category: Ahmed, I]] | + | [[Category: Ahmed I]] |
- | [[Category: Cryle, M J]] | + | [[Category: Cryle MJ]] |
- | [[Category: Greule, A]] | + | [[Category: De Voss J]] |
- | [[Category: Izore, T]] | + | [[Category: Greule A]] |
- | [[Category: Kulik, A]] | + | [[Category: Izore T]] |
- | [[Category: Peschke, M]] | + | [[Category: Kulik A]] |
- | [[Category: Schoppet, M]] | + | [[Category: Peschke M]] |
- | [[Category: Stegmann, E]] | + | [[Category: Schoppet M]] |
- | [[Category: Tailhades, J]] | + | [[Category: Stegmann E]] |
- | [[Category: Voss, J De]]
| + | [[Category: Tailhades J]] |
- | [[Category: Ziemert, N]] | + | [[Category: Ziemert N]] |
- | [[Category: Biosynthetic protein]]
| + | |
- | [[Category: Gpa]]
| + | |
- | [[Category: Monooxygenase]]
| + | |
- | [[Category: Nrp]]
| + | |
- | [[Category: P450]]
| + | |
- | [[Category: X-domain]]
| + | |
| Structural highlights
Function
A0A2P9IBG7_9ACTN
Publication Abstract from PubMed
Kistamicin is a divergent member of the glycopeptide antibiotics, a structurally complex class of important, clinically relevant antibiotics often used as the last resort against resistant bacteria. The extensively crosslinked structure of these antibiotics that is essential for their activity makes their chemical synthesis highly challenging and limits their production to bacterial fermentation. Kistamicin contains three crosslinks, including an unusual 15-membered A-O-B ring, despite the presence of only two Cytochrome P450 Oxy enzymes thought to catalyse formation of such crosslinks within the biosynthetic gene cluster. In this study, we characterise the kistamicin cyclisation pathway, showing that the two Oxy enzymes are responsible for these crosslinks within kistamicin and that they function through interactions with the X-domain, unique to glycopeptide antibiotic biosynthesis. We also show that the kistamicin OxyC enzyme is a promiscuous biocatalyst, able to install multiple crosslinks into peptides containing phenolic amino acids.
Kistamicin biosynthesis reveals the biosynthetic requirements for production of highly crosslinked glycopeptide antibiotics.,Greule A, Izore T, Iftime D, Tailhades J, Schoppet M, Zhao Y, Peschke M, Ahmed I, Kulik A, Adamek M, Goode RJA, Schittenhelm RB, Kaczmarski JA, Jackson CJ, Ziemert N, Krenske EH, De Voss JJ, Stegmann E, Cryle MJ Nat Commun. 2019 Jun 13;10(1):2613. doi: 10.1038/s41467-019-10384-w. PMID:31197182[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Greule A, Izore T, Iftime D, Tailhades J, Schoppet M, Zhao Y, Peschke M, Ahmed I, Kulik A, Adamek M, Goode RJA, Schittenhelm RB, Kaczmarski JA, Jackson CJ, Ziemert N, Krenske EH, De Voss JJ, Stegmann E, Cryle MJ. Kistamicin biosynthesis reveals the biosynthetic requirements for production of highly crosslinked glycopeptide antibiotics. Nat Commun. 2019 Jun 13;10(1):2613. doi: 10.1038/s41467-019-10384-w. PMID:31197182 doi:http://dx.doi.org/10.1038/s41467-019-10384-w
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