This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
6v3d
From Proteopedia
(Difference between revisions)
| (3 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Cryo-EM structure of the Acinetobacter baumannii Ribosome: 50S subunit== | |
| + | <SX load='6v3d' size='340' side='right' viewer='molstar' caption='[[6v3d]], [[Resolution|resolution]] 2.95Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[6v3d]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_baumannii_AB0057 Acinetobacter baumannii AB0057], [https://en.wikipedia.org/wiki/Acinetobacter_rudis_CIP_110305 Acinetobacter rudis CIP 110305], [https://en.wikipedia.org/wiki/Acinetobacter_sp._CIP_102082 Acinetobacter sp. CIP 102082] and [https://en.wikipedia.org/wiki/Acinetobacter_sp._CIP_51.11 Acinetobacter sp. CIP 51.11]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6V3D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6V3D FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.95Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2MA:2-METHYLADENOSINE-5-MONOPHOSPHATE'>2MA</scene>, <scene name='pdbligand=2MG:2N-METHYLGUANOSINE-5-MONOPHOSPHATE'>2MG</scene>, <scene name='pdbligand=3TD:(1S)-1,4-ANHYDRO-1-(3-METHYL-2,4-DIOXO-1,2,3,4-TETRAHYDROPYRIMIDIN-5-YL)-5-O-PHOSPHONO-D-RIBITOL'>3TD</scene>, <scene name='pdbligand=5MU:5-METHYLURIDINE+5-MONOPHOSPHATE'>5MU</scene>, <scene name='pdbligand=6MZ:N6-METHYLADENOSINE-5-MONOPHOSPHATE'>6MZ</scene>, <scene name='pdbligand=7MG:7N-METHYL-8-HYDROGUANOSINE-5-MONOPHOSPHATE'>7MG</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=OMG:O2-METHYLGUANOSINE-5-MONOPHOSPHATE'>OMG</scene>, <scene name='pdbligand=OMU:O2-METHYLURIDINE+5-MONOPHOSPHATE'>OMU</scene>, <scene name='pdbligand=PSU:PSEUDOURIDINE-5-MONOPHOSPHATE'>PSU</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6v3d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6v3d OCA], [https://pdbe.org/6v3d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6v3d RCSB], [https://www.ebi.ac.uk/pdbsum/6v3d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6v3d ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/RL17_ACIB5 RL17_ACIB5] | ||
| - | + | ==See Also== | |
| - | + | *[[Ribosome 3D structures|Ribosome 3D structures]] | |
| - | + | __TOC__ | |
| - | [[Category: | + | </SX> |
| - | [[Category: Morgan | + | [[Category: Acinetobacter baumannii AB0057]] |
| - | [[Category: Yu | + | [[Category: Acinetobacter rudis CIP 110305]] |
| + | [[Category: Acinetobacter sp. CIP 102082]] | ||
| + | [[Category: Acinetobacter sp. CIP 51 11]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Morgan CE]] | ||
| + | [[Category: Yu EW]] | ||
Current revision
Cryo-EM structure of the Acinetobacter baumannii Ribosome: 50S subunit
| |||||||||
