6vkz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "6vkz" [edit=sysop:move=sysop])
Current revision (14:38, 6 March 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6vkz is ON HOLD
+
==Crystal Structure of the N-prenyltransferase DabA in Complex with GSPP and Mg2+==
-
 
+
<StructureSection load='6vkz' size='340' side='right'caption='[[6vkz]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
Authors: Chekan, J.R., Noel, J.P., Moore, B.S.
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[6vkz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudo-nitzschia_multiseries Pseudo-nitzschia multiseries]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6VKZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6VKZ FirstGlance]. <br>
-
Description: Crystal Structure of the N-prenyltransferase DabA in Complex with GSPP and Mg2+
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
[[Category: Unreleased Structures]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GST:GERANYL+S-THIOLODIPHOSPHATE'>GST</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
[[Category: Noel, J.P]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6vkz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6vkz OCA], [https://pdbe.org/6vkz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6vkz RCSB], [https://www.ebi.ac.uk/pdbsum/6vkz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6vkz ProSAT]</span></td></tr>
-
[[Category: Moore, B.S]]
+
</table>
-
[[Category: Chekan, J.R]]
+
== Function ==
 +
[https://www.uniprot.org/uniprot/DABA_PSEMU DABA_PSEMU] Magnesium-dependent glutamate N-prenyltransferase: part of the gene cluster that mediates the biosynthesis of domoic acid (DA) and derivatives, natural products with neurochemical activity acting as ionotropic glutamate receptor (iGluR) agonists, thus being neurotoxins causing amnesic shellfish poisoning (ASP) (PubMed:30262498). Catalyzes the conversion of L-glutamic acid (L-Glu) to N-geranyl-L-glutamic acid (NGG) in the presence of geranyl diphosphate (GPP) (PubMed:30262498, PubMed:32457155). Also able to catalyze the formation of farnesyl-L-glutamate from farnesyl diphosphate (FPP) (PubMed:32457155). Cannot use dimethylallyl diphosphate (DMAPP) as substrate (PubMed:32457155).<ref>PMID:30262498</ref> <ref>PMID:32457155</ref>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Pseudo-nitzschia multiseries]]
 +
[[Category: Chekan JR]]
 +
[[Category: Moore BS]]
 +
[[Category: Noel JP]]

Current revision

Crystal Structure of the N-prenyltransferase DabA in Complex with GSPP and Mg2+

PDB ID 6vkz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools