6vl1
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 6vl1 is ON HOLD Authors: Chekan, J.R., Noel, J.P., Moore, B.S. Description: Crystal Structure of the N-prenyltransferase DabA in Complex with NGG a...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal Structure of the N-prenyltransferase DabA in Complex with NGG and Mg2+== | |
| - | + | <StructureSection load='6vl1' size='340' side='right'caption='[[6vl1]], [[Resolution|resolution]] 2.10Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[6vl1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudo-nitzschia_multiseries Pseudo-nitzschia multiseries]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6VL1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6VL1 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> | |
| - | [[Category: | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=R1V:N-[(2E)-3,7-dimethylocta-2,6-dien-1-yl]-L-glutamic+acid'>R1V</scene></td></tr> |
| - | [[Category: | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6vl1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6vl1 OCA], [https://pdbe.org/6vl1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6vl1 RCSB], [https://www.ebi.ac.uk/pdbsum/6vl1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6vl1 ProSAT]</span></td></tr> |
| - | [[Category: Moore | + | </table> |
| - | [[Category: | + | == Function == |
| + | [https://www.uniprot.org/uniprot/DABA_PSEMU DABA_PSEMU] Magnesium-dependent glutamate N-prenyltransferase: part of the gene cluster that mediates the biosynthesis of domoic acid (DA) and derivatives, natural products with neurochemical activity acting as ionotropic glutamate receptor (iGluR) agonists, thus being neurotoxins causing amnesic shellfish poisoning (ASP) (PubMed:30262498). Catalyzes the conversion of L-glutamic acid (L-Glu) to N-geranyl-L-glutamic acid (NGG) in the presence of geranyl diphosphate (GPP) (PubMed:30262498, PubMed:32457155). Also able to catalyze the formation of farnesyl-L-glutamate from farnesyl diphosphate (FPP) (PubMed:32457155). Cannot use dimethylallyl diphosphate (DMAPP) as substrate (PubMed:32457155).<ref>PMID:30262498</ref> <ref>PMID:32457155</ref> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Pseudo-nitzschia multiseries]] | ||
| + | [[Category: Chekan JR]] | ||
| + | [[Category: Moore BS]] | ||
| + | [[Category: Noel JP]] | ||
Current revision
Crystal Structure of the N-prenyltransferase DabA in Complex with NGG and Mg2+
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