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| <StructureSection load='3zf2' size='340' side='right'caption='[[3zf2]], [[Resolution|resolution]] 2.90Å' scene=''> | | <StructureSection load='3zf2' size='340' side='right'caption='[[3zf2]], [[Resolution|resolution]] 2.90Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[3zf2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteriophage_80_alpha Bacteriophage 80 alpha]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZF2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZF2 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[3zf2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_virus_80alpha Staphylococcus virus 80alpha]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZF2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ZF2 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9Å</td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3zez|3zez]], [[3zf0|3zf0]], [[3zf1|3zf1]], [[3zf3|3zf3]], [[3zf4|3zf4]], [[3zf5|3zf5]], [[3zf6|3zf6]]</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/dUTP_diphosphatase dUTP diphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.23 3.6.1.23] </span></td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3zf2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zf2 OCA], [https://pdbe.org/3zf2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3zf2 RCSB], [https://www.ebi.ac.uk/pdbsum/3zf2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3zf2 ProSAT]</span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3zf2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zf2 OCA], [http://pdbe.org/3zf2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3zf2 RCSB], [http://www.ebi.ac.uk/pdbsum/3zf2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3zf2 ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/A4ZF98_9CAUD A4ZF98_9CAUD] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Bacteriophage 80 alpha]] | |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: DUTP diphosphatase]] | + | [[Category: Staphylococcus virus 80alpha]] |
- | [[Category: Alt, A]] | + | [[Category: Alt A]] |
- | [[Category: Donderis, J]] | + | [[Category: Donderis J]] |
- | [[Category: Garcia-Caballer, M]] | + | [[Category: Garcia-Caballer M]] |
- | [[Category: Marina, A]] | + | [[Category: Marina A]] |
- | [[Category: Mir-Sanchis, I]] | + | [[Category: Mir-Sanchis I]] |
- | [[Category: Penades, J R]] | + | [[Category: Penades JR]] |
- | [[Category: Tormo-Mas, M A]] | + | [[Category: Tormo-Mas MA]] |
- | [[Category: Dutp]]
| + | |
- | [[Category: G-protein]]
| + | |
- | [[Category: Gene transfer]]
| + | |
- | [[Category: Hydrolase]]
| + | |
- | [[Category: Moonlighting protein]]
| + | |
- | [[Category: P-loop]]
| + | |
- | [[Category: Pathogenicity island]]
| + | |
- | [[Category: Sapi induction]]
| + | |
| Structural highlights
Function
A4ZF98_9CAUD
Publication Abstract from PubMed
dUTPases (Duts) have emerged as promising regulatory molecules controlling relevant cellular processes. However, the mechanism underlying this regulatory function remains enigmatic. Using staphylococcal pathogenicity island (SaPI) repression as a model, we report here that phage Duts induce the transfer of SaPI-encoded virulence factors by switching between active (dUTP-bound) and inactive (apo state) conformations, a conversion catalyzed by their intrinsic dUTPase activity. Crystallographic and mutagenic analyses demonstrate that binding to dUTP reorders the C-terminal motif V of the phage-encoded Duts, rendering these proteins into the active conformation required for SaPI derepression. By contrast, the conversion to the apo state conformation by hydrolysis of the bound dUTP generates a protein that is unable to induce the SaPI cycle. Because none of the requirements involving Duts in SaPI transfer are exclusive to the phage-encoded proteins, we propose that Duts are widespread cellular regulators acting in a manner analogous to the eukaryotic G proteins.
Phage dUTPases Control Transfer of Virulence Genes by a Proto-Oncogenic G Protein-like Mechanism.,Tormo-Mas MA, Donderis J, Garcia-Caballer M, Alt A, Mir-Sanchis I, Marina A, Penades JR Mol Cell. 2013 Jan 15. pii: S1097-2765(12)01049-0. doi:, 10.1016/j.molcel.2012.12.013. PMID:23333307[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Tormo-Mas MA, Donderis J, Garcia-Caballer M, Alt A, Mir-Sanchis I, Marina A, Penades JR. Phage dUTPases Control Transfer of Virulence Genes by a Proto-Oncogenic G Protein-like Mechanism. Mol Cell. 2013 Jan 15. pii: S1097-2765(12)01049-0. doi:, 10.1016/j.molcel.2012.12.013. PMID:23333307 doi:http://dx.doi.org/10.1016/j.molcel.2012.12.013
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