205d

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<StructureSection load='205d' size='340' side='right'caption='[[205d]], [[Resolution|resolution]] 2.64&Aring;' scene=''>
<StructureSection load='205d' size='340' side='right'caption='[[205d]], [[Resolution|resolution]] 2.64&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[205d]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=205D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=205D FirstGlance]. <br>
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<table><tr><td colspan='2'>[[205d]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=205D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=205D FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=205d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=205d OCA], [http://pdbe.org/205d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=205d RCSB], [http://www.ebi.ac.uk/pdbsum/205d PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=205d ProSAT]</span></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.64&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=205d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=205d OCA], [https://pdbe.org/205d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=205d RCSB], [https://www.ebi.ac.uk/pdbsum/205d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=205d ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
 
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== Publication Abstract from PubMed ==
 
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The crystal structure of the RNA dodecamer 5'-GGACUUUGGUCC-3' has been determined from X-ray diffraction data to 2.6 A resolution. This oligomer forms an asymmetric double helix in the crystal. Four consecutive non-Watson-Crick base-pairs are formed in the middle of the duplex including the first intrahelical U-U (or T-T) pairs observed in an oligonucleotide crystal structure. Two different conformations of U-U pairs are observed in the context of the surrounding sequence. One of these pairs is highly twisted, allowing a bound water to bridge across strands in the major groove. The crystal packing illustrates a new form of RNA helix-helix interaction.
 
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Structure of an RNA double helix including uracil-uracil base pairs in an internal loop.,Baeyens KJ, De Bondt HL, Holbrook SR Nat Struct Biol. 1995 Jan;2(1):56-62. PMID:7719854<ref>PMID:7719854</ref>
 
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
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</div>
 
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<div class="pdbe-citations 205d" style="background-color:#fffaf0;"></div>
 
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Baeyens, K J]]
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[[Category: Baeyens KJ]]
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[[Category: Bondt, H L.De]]
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[[Category: De Bondt HL]]
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[[Category: Holbrook, S R]]
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[[Category: Holbrook SR]]
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[[Category: A-rna]]
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[[Category: Double helix]]
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[[Category: Internal loop]]
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[[Category: Mismatched]]
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[[Category: Rna]]
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Current revision

STRUCTURE OF AN RNA DOUBLE HELIX INCLUDING URACIL-URACIL BASE PAIRS IN AN INTERNAL LOOP

PDB ID 205d

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