|
|
(One intermediate revision not shown.) |
Line 3: |
Line 3: |
| <StructureSection load='2abb' size='340' side='right'caption='[[2abb]], [[Resolution|resolution]] 1.00Å' scene=''> | | <StructureSection load='2abb' size='340' side='right'caption='[[2abb]], [[Resolution|resolution]] 1.00Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[2abb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"aerobacter_cloacae"_(jordan_1890)_bergey_et_al._1923 "aerobacter cloacae" (jordan 1890) bergey et al. 1923]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ABB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ABB FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[2abb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterobacter_cloacae Enterobacter cloacae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ABB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ABB FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene>, <scene name='pdbligand=SCN:THIOCYANATE+ION'>SCN</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1Å</td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1h60|1h60]], [[1vyr|1vyr]], [[2aba|2aba]]</td></tr>
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene>, <scene name='pdbligand=SCN:THIOCYANATE+ION'>SCN</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2abb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2abb OCA], [http://pdbe.org/2abb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2abb RCSB], [http://www.ebi.ac.uk/pdbsum/2abb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2abb ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2abb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2abb OCA], [https://pdbe.org/2abb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2abb RCSB], [https://www.ebi.ac.uk/pdbsum/2abb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2abb ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/P71278_ENTCL P71278_ENTCL] |
| == Evolutionary Conservation == | | == Evolutionary Conservation == |
| [[Image:Consurf_key_small.gif|200px|right]] | | [[Image:Consurf_key_small.gif|200px|right]] |
Line 34: |
Line 36: |
| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
| + | [[Category: Enterobacter cloacae]] |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Barna, T]] | + | [[Category: Barna T]] |
- | [[Category: Bruce, N C]] | + | [[Category: Bruce NC]] |
- | [[Category: Khan, H]] | + | [[Category: Khan H]] |
- | [[Category: Leys, D]] | + | [[Category: Leys D]] |
- | [[Category: Munro, A W]] | + | [[Category: Munro AW]] |
- | [[Category: Scrutton, N S]] | + | [[Category: Scrutton NS]] |
- | [[Category: Flavoenzyme]]
| + | |
- | [[Category: Oxidoreductase]]
| + | |
- | [[Category: Petn reductase]]
| + | |
- | [[Category: Proton transfer]]
| + | |
| Structural highlights
Function
P71278_ENTCL
Evolutionary Conservation
Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
Publication Abstract from PubMed
The roles of His181, His184 and Tyr186 in PETN reductase have been examined by mutagenesis, spectroscopic and stopped-flow kinetics, and by determination of crystallographic structures for the Y186F PETN reductase and reduced wild-type enzyme-progesterone complex. Residues His181 and His184 are important in the binding of coenzyme, steroids, nitroaromatic ligands and the substrate 2-cyclohexen-1-one. The H181A and H184A enzymes retain activity in reductive and oxidative half-reactions, and thus do not play an essential role in catalysis. Ligand binding and catalysis is not substantially impaired in Y186F PETN reductase, which contrasts with data for the equivalent mutation (Y196F) in Old Yellow Enzyme. The structure of Y186F PETN reductase is identical to wild-type enzyme, with the obvious exception of the mutation. We show in PETN reductase that Tyr186 is not a key proton donor in the reduction of alpha/beta unsaturated carbonyl compounds. The structure of two electron-reduced PETN reductase bound to the inhibitor progesterone mimics the catalytic enzyme-steroid substrate complex and is similar to the structure of the oxidized enzyme-inhibitor complex. The reactive C1-C2 unsaturated bond of the steroid is inappropriately orientated with the flavin N5 atom for hydride transfer. With steroid substrates, the productive conformation is achieved by orientating the steroid through flipping by 180 degrees , consistent with known geometries for hydride transfer in flavoenzymes. Our data highlight mechanistic differences between Old Yellow Enzyme and PETN reductase and indicate that catalysis requires a metastable enzyme-steroid complex and not the most stable complex observed in crystallographic studies.
Proton transfer in the oxidative half-reaction of pentaerythritol tetranitrate reductase. Structure of the reduced enzyme-progesterone complex and the roles of residues Tyr186, His181, His184.,Khan H, Barna T, Bruce NC, Munro AW, Leys D, Scrutton NS FEBS J. 2005 Sep;272(18):4660-71. PMID:16156787[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Khan H, Barna T, Bruce NC, Munro AW, Leys D, Scrutton NS. Proton transfer in the oxidative half-reaction of pentaerythritol tetranitrate reductase. Structure of the reduced enzyme-progesterone complex and the roles of residues Tyr186, His181, His184. FEBS J. 2005 Sep;272(18):4660-71. PMID:16156787 doi:10.1111/j.1742-4658.2005.04875.x
|