This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4lx5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:27, 20 September 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='4lx5' size='340' side='right'caption='[[4lx5]], [[Resolution|resolution]] 2.13&Aring;' scene=''>
<StructureSection load='4lx5' size='340' side='right'caption='[[4lx5]], [[Resolution|resolution]] 2.13&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4lx5]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LX5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4LX5 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4lx5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_vulnificus Vibrio vulnificus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LX5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LX5 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=29G:PYRIMIDO[4,5-D]PYRIMIDINE-2,4-DIAMINE'>29G</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.13&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3la5|3la5]], [[4lx6|4lx6]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=29G:PYRIMIDO[4,5-D]PYRIMIDINE-2,4-DIAMINE'>29G</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4lx5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lx5 OCA], [http://pdbe.org/4lx5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4lx5 RCSB], [http://www.ebi.ac.uk/pdbsum/4lx5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4lx5 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4lx5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lx5 OCA], [https://pdbe.org/4lx5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4lx5 RCSB], [https://www.ebi.ac.uk/pdbsum/4lx5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4lx5 ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 22: Line 22:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Dunstan, M S]]
+
[[Category: Vibrio vulnificus]]
-
[[Category: Leys, D]]
+
[[Category: Dunstan MS]]
-
[[Category: Gene expression platform]]
+
[[Category: Leys D]]
-
[[Category: Riboswitch]]
+
-
[[Category: Rna]]
+

Current revision

X-ray crystal structure of the M6" riboswitch aptamer bound to pyrimido[4,5-d]pyrimidine-2,4-diamine (PPDA)

PDB ID 4lx5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools