6vsj

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'''Unreleased structure'''
 
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The entry 6vsj is ON HOLD
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==Cryo-electron microscopy structure of mouse coronavirus spike protein complexed with its murine receptor==
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<SX load='6vsj' size='340' side='right' viewer='molstar' caption='[[6vsj]], [[Resolution|resolution]] 3.94&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6vsj]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Murine_hepatitis_virus_strain_A59 Murine hepatitis virus strain A59] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6VSJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6VSJ FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.94&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6vsj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6vsj OCA], [https://pdbe.org/6vsj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6vsj RCSB], [https://www.ebi.ac.uk/pdbsum/6vsj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6vsj ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/SPIKE_CVMA5 SPIKE_CVMA5] S1 attaches the virion to the cell membrane by interacting with murine CEACAM1, initiating the infection.<ref>PMID:16014947</ref> S2 is a class I viral fusion protein. Under the current model, the protein has at least 3 conformational states: pre-fusion native state, pre-hairpin intermediate state, and post-fusion hairpin state. During viral and target cell membrane fusion, the coiled coil regions (heptad repeats) assume a trimer-of-hairpins structure, positioning the fusion peptide in close proximity to the C-terminal region of the ectodomain. The formation of this structure appears to drive apposition and subsequent fusion of viral and plasma cell membranes. Presumably interacts with target cell lipid raft after cell attachment.<ref>PMID:16014947</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Coronaviruses recognize a variety of receptors using different domains of their envelope-anchored spike protein. How these diverse receptor recognition patterns affect viral entry is unknown. Mouse hepatitis coronavirus (MHV) is the only known coronavirus that uses the N-terminal domain (NTD) of its spike to recognize a protein receptor, CEACAM1a. Here we determined the cryo-EM structure of MHV spike complexed with mouse CEACAM1a. The trimeric spike contains three receptor-binding S1 heads sitting on top of a trimeric membrane-fusion S2 stalk. Three receptor molecules bind to the sides of the spike trimer, where three NTDs are located. Receptor binding induces structural changes in the spike, weakening the interactions between S1 and S2. Using protease sensitivity and negative-stain EM analyses, we further showed that after protease treatment of the spike, receptor binding facilitated the dissociation of S1 from S2, allowing S2 to transition from pre-fusion to post-fusion conformation. Together these results reveal a new role of receptor binding in MHV entry: in addition to its well-characterized role in viral attachment to host cells, receptor binding also induces the conformational change of the spike and hence the fusion of viral and host membranes. Our study provides new mechanistic insight into coronavirus entry and highlights the diverse entry mechanisms used by different viruses.
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Authors:
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Structure of mouse coronavirus spike protein complexed with receptor reveals mechanism for viral entry.,Shang J, Wan Y, Liu C, Yount B, Gully K, Yang Y, Auerbach A, Peng G, Baric R, Li F PLoS Pathog. 2020 Mar 9;16(3):e1008392. doi: 10.1371/journal.ppat.1008392., eCollection 2020 Mar. PMID:32150576<ref>PMID:32150576</ref>
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Description:
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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<div class="pdbe-citations 6vsj" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Sandbox 3001|Sandbox 3001]]
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*[[Spike protein 3D structures|Spike protein 3D structures]]
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== References ==
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<references/>
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__TOC__
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</SX>
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[[Category: Large Structures]]
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[[Category: Murine hepatitis virus strain A59]]
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[[Category: Mus musculus]]
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[[Category: Auerbach A]]
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[[Category: Baric R]]
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[[Category: Gully K]]
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[[Category: Li F]]
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[[Category: Liu C]]
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[[Category: Peng GQ]]
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[[Category: Shang J]]
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[[Category: Wan YS]]
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[[Category: Yang Y]]
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[[Category: Yount B]]

Current revision

Cryo-electron microscopy structure of mouse coronavirus spike protein complexed with its murine receptor

6vsj, resolution 3.94Å

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