1a4f

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(New page: 200px<br /> <applet load="1a4f" size="450" color="white" frame="true" align="right" spinBox="true" caption="1a4f, resolution 2.0&Aring;" /> '''BAR-HEADED GOOSE HEM...)
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[[Image:1a4f.gif|left|200px]]<br />
 
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<applet load="1a4f" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="1a4f, resolution 2.0&Aring;" />
 
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'''BAR-HEADED GOOSE HEMOGLOBIN (OXY FORM)'''<br />
 
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==Overview==
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==BAR-HEADED GOOSE HEMOGLOBIN (OXY FORM)==
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We have determined the crystal structure of bar-headed goose haemoglobin, in the oxy form to a resolution of 2.0 A. The R-factor of the model is, 19.8%. The structure is similar to human HbA, but contacts between the, subunits show slightly altered packing of the tetramer. Bar-headed goose, blood shows a greatly elevated oxygen affinity compared to closely related, species of geese. This is apparently due to a single proline to alanine, mutation at the alpha 1 beta 1 interface which destabilises the T state of, the protein. The beta chain N and C termini are well-localized, and, together with other neighbouring basic groups they form a strongly, positively charged groove at the entrance to the central cavity around the, molecular dyad. The well-ordered conformation and the three-dimensional, distribution of positive charges clearly indicate this area to be the, inositol pentaphosphate binding site of bird haemoglobins.
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<StructureSection load='1a4f' size='340' side='right'caption='[[1a4f]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1a4f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Anser_indicus Anser indicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1A4F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1A4F FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=OXY:OXYGEN+MOLECULE'>OXY</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1a4f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1a4f OCA], [https://pdbe.org/1a4f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1a4f RCSB], [https://www.ebi.ac.uk/pdbsum/1a4f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1a4f ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/HBA_ANSIN HBA_ANSIN] Involved in oxygen transport from the lung to the various peripheral tissues.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a4/1a4f_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1a4f ConSurf].
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<div style="clear:both"></div>
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==About this Structure==
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==See Also==
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1A4F is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Anser_indicus Anser indicus] with HEM and OXY as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1A4F OCA].
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*[[Hemoglobin 3D structures|Hemoglobin 3D structures]]
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__TOC__
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==Reference==
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</StructureSection>
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The crystal structure of a high oxygen affinity species of haemoglobin (bar-headed goose haemoglobin in the oxy form)., Zhang J, Hua Z, Tame JR, Lu G, Zhang R, Gu X, J Mol Biol. 1996 Jan 26;255(3):484-93. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=8568892 8568892]
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[[Category: Anser indicus]]
[[Category: Anser indicus]]
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[[Category: Protein complex]]
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[[Category: Large Structures]]
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[[Category: Gu, X.]]
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[[Category: Gu X]]
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[[Category: Zhang, J.]]
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[[Category: Zhang J]]
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[[Category: HEM]]
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[[Category: OXY]]
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[[Category: erythrocyte]]
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[[Category: heme]]
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[[Category: oxygen transport]]
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[[Category: respiratory protein]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Thu Nov 8 12:56:26 2007''
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Current revision

BAR-HEADED GOOSE HEMOGLOBIN (OXY FORM)

PDB ID 1a4f

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