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| | <StructureSection load='4rwm' size='340' side='right'caption='[[4rwm]], [[Resolution|resolution]] 1.80Å' scene=''> | | <StructureSection load='4rwm' size='340' side='right'caption='[[4rwm]], [[Resolution|resolution]] 1.80Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[4rwm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Candidatus_kuenenia_stuttgartiensis Candidatus kuenenia stuttgartiensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RWM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RWM FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4rwm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Candidatus_Kuenenia_stuttgartiensis Candidatus Kuenenia stuttgartiensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RWM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4RWM FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=HG1:1-[(4-CYCLOHEXYLBUTANOYL)(2-HYDROXYETHYL)AMINO]-1-DEOXY-D-GLUCITOL'>HG1</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4n4j|4n4j]]</td></tr>
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=HG1:1-[(4-CYCLOHEXYLBUTANOYL)(2-HYDROXYETHYL)AMINO]-1-DEOXY-D-GLUCITOL'>HG1</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Hydroxylamine_dehydrogenase Hydroxylamine dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.7.2.6 1.7.2.6] </span></td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4rwm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rwm OCA], [https://pdbe.org/4rwm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4rwm RCSB], [https://www.ebi.ac.uk/pdbsum/4rwm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4rwm ProSAT]</span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rwm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rwm OCA], [http://pdbe.org/4rwm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4rwm RCSB], [http://www.ebi.ac.uk/pdbsum/4rwm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4rwm ProSAT]</span></td></tr> | + | |
| | </table> | | </table> |
| | + | == Function == |
| | + | [https://www.uniprot.org/uniprot/HAO_KUEST HAO_KUEST] Catalyzes the oxidation of hydroxylamine to nitric oxide with cytochrome c acting as an electron acceptor (PubMed:21964329, PubMed:24302732). Does not oxidize hydroxylamine to nitrite (PubMed:24302732). Also able to catalyze the four-electron oxidation of hydrazine to N(2) in vitro with reduced efficiency; however, this reaction is probably not physiological (PubMed:21964329, PubMed:24302732).<ref>PMID:21964329</ref> <ref>PMID:24302732</ref> |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Candidatus kuenenia stuttgartiensis]] | + | [[Category: Candidatus Kuenenia stuttgartiensis]] |
| - | [[Category: Hydroxylamine dehydrogenase]]
| + | |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Barends, T R.M]] | + | [[Category: Barends TRM]] |
| - | [[Category: Dietl, A]] | + | [[Category: Dietl A]] |
| - | [[Category: Maalcke, W]] | + | [[Category: Maalcke W]] |
| - | [[Category: Oxidoreductase]]
| + | |
| - | [[Category: P468 cofactor]]
| + | |
| Structural highlights
Function
HAO_KUEST Catalyzes the oxidation of hydroxylamine to nitric oxide with cytochrome c acting as an electron acceptor (PubMed:21964329, PubMed:24302732). Does not oxidize hydroxylamine to nitrite (PubMed:24302732). Also able to catalyze the four-electron oxidation of hydrazine to N(2) in vitro with reduced efficiency; however, this reaction is probably not physiological (PubMed:21964329, PubMed:24302732).[1] [2]
Publication Abstract from PubMed
Hydroxylamine oxidoreductases (HAOs) contain a unique haem cofactor called P460 that consists of a profoundly ruffled c-type haem with two covalent bonds between the haem porphyrin and a conserved tyrosine. This cofactor is exceptional in that it abstracts electrons from a ligand bound to the haem iron, whereas other haems involved in redox chemistry usually inject electrons into their ligands. The effects of the tyrosine cross-links and of the haem ruffling on the chemistry of this cofactor have been investigated theoretically but are not yet clear. A new crystal structure of an HAO from Candidatus Kuenenia stuttgartiensis, a model organism for anaerobic ammonium oxidation, now shows that its P460 cofactor has yet another unexpected reactivity: when ethylene glycol was used as a cryoprotectant, the 1.8 A resolution electron-density maps showed additional density which could be interpreted as an ethylene glycol molecule covalently bound to the C16 atom of the haem ring, opposite the covalent links to the conserved tyrosine. Possible causes for this unexpected reactivity are discussed.
An unexpected reactivity of the P460 cofactor in hydroxylamine oxidoreductase.,Dietl A, Maalcke W, Barends TR Acta Crystallogr D Biol Crystallogr. 2015 Aug;71(Pt 8):1708-13. doi:, 10.1107/S1399004715010706. Epub 2015 Jul 31. PMID:26249351[3]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Kartal B, Maalcke WJ, de Almeida NM, Cirpus I, Gloerich J, Geerts W, Op den Camp HJ, Harhangi HR, Janssen-Megens EM, Francoijs KJ, Stunnenberg HG, Keltjens JT, Jetten MS, Strous M. Molecular mechanism of anaerobic ammonium oxidation. Nature. 2011 Oct 2;479(7371):127-30. doi: 10.1038/nature10453. PMID:21964329 doi:http://dx.doi.org/10.1038/nature10453
- ↑ Maalcke WJ, Dietl A, Marritt SJ, Butt JN, Jetten MS, Keltjens JT, Barends TR, Kartal B. Structural basis of biological NO generation by octaheme oxidoreductases. J Biol Chem. 2013 Dec 3. PMID:24302732 doi:http://dx.doi.org/10.1074/jbc.M113.525147
- ↑ Dietl A, Maalcke W, Barends TR. An unexpected reactivity of the P460 cofactor in hydroxylamine oxidoreductase. Acta Crystallogr D Biol Crystallogr. 2015 Aug;71(Pt 8):1708-13. doi:, 10.1107/S1399004715010706. Epub 2015 Jul 31. PMID:26249351 doi:http://dx.doi.org/10.1107/S1399004715010706
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