4q5b

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:18, 27 November 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='4q5b' size='340' side='right'caption='[[4q5b]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='4q5b' size='340' side='right'caption='[[4q5b]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4q5b]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thioalkalivibrio_nitratireducens Thioalkalivibrio nitratireducens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Q5B OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4Q5B FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4q5b]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thioalkalivibrio_nitratireducens Thioalkalivibrio nitratireducens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Q5B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4Q5B FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=SO3:SULFITE+ION'>SO3</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4q4u|4q4u]], [[4q5c|4q5c]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=SO3:SULFITE+ION'>SO3</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4q5b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4q5b OCA], [http://pdbe.org/4q5b PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4q5b RCSB], [http://www.ebi.ac.uk/pdbsum/4q5b PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4q5b ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4q5b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4q5b OCA], [https://pdbe.org/4q5b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4q5b RCSB], [https://www.ebi.ac.uk/pdbsum/4q5b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4q5b ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/Q5F2I3_9GAMM Q5F2I3_9GAMM]] Plays a role in nitrite reduction (By similarity).[SAAS:SAAS003321_004_001592]
+
[https://www.uniprot.org/uniprot/NIR_THIND NIR_THIND] Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process (PubMed:16500161, PubMed:22281743). Has very low activity toward hydroxylamine (PubMed:16500161). Has even lower activity toward sulfite (PubMed:16500161, PubMed:22281743). Sulfite reductase activity is maximal at neutral pH (PubMed:20944237).<ref>PMID:16500161</ref> <ref>PMID:20944237</ref> <ref>PMID:22281743</ref>
==See Also==
==See Also==
*[[Cytochrome c nitrite reductase|Cytochrome c nitrite reductase]]
*[[Cytochrome c nitrite reductase|Cytochrome c nitrite reductase]]
-
*[[Nitrite reductase 3D structures|Nitrite reductase 3D structures]]
+
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Thioalkalivibrio nitratireducens]]
[[Category: Thioalkalivibrio nitratireducens]]
-
[[Category: Lazarenko, V A]]
+
[[Category: Lazarenko VA]]
-
[[Category: Polyakov, K M]]
+
[[Category: Polyakov KM]]
-
[[Category: Popov, A N]]
+
[[Category: Popov AN]]
-
[[Category: Popov, V O]]
+
[[Category: Popov VO]]
-
[[Category: Tikhonov, A V]]
+
[[Category: Tikhonov AV]]
-
[[Category: Tikhonova, T V]]
+
[[Category: Tikhonova TV]]
-
[[Category: Trofimov, A A]]
+
[[Category: Trofimov AA]]
-
[[Category: Hemes c]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

TvNiR in complex with sulfite, high dose data set

PDB ID 4q5b

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools