This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
6tup
From Proteopedia
(Difference between revisions)
| (2 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
==Cryo-EM structure of Pf4 bacteriophage coat protein with single-stranded DNA== | ==Cryo-EM structure of Pf4 bacteriophage coat protein with single-stranded DNA== | ||
| - | < | + | <SX load='6tup' size='340' side='right' viewer='molstar' caption='[[6tup]], [[Resolution|resolution]] 3.20Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[6tup]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[6tup]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1] and [https://en.wikipedia.org/wiki/Pseudomonas_virus_Pf1 Pseudomonas virus Pf1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6TUP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6TUP FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.2Å</td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6tup FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6tup OCA], [https://pdbe.org/6tup PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6tup RCSB], [https://www.ebi.ac.uk/pdbsum/6tup PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6tup ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/CAPSD_BPPF1 CAPSD_BPPF1] Self assembles to form a helical capsid wrapping up the viral genomic DNA. The capsid displays a filamentous structure with a length of 760-1950 nm and a width of 6-8 nm. The virion assembly and budding take place at the host inner membrane (By similarity). | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 15: | Line 18: | ||
</div> | </div> | ||
<div class="pdbe-citations 6tup" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 6tup" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
| - | </ | + | </SX> |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Pseudomonas aeruginosa | + | [[Category: Pseudomonas aeruginosa PAO1]] |
| - | [[Category: Pseudomonas virus | + | [[Category: Pseudomonas virus Pf1]] |
| - | [[Category: Bharat | + | [[Category: Bharat TAM]] |
| - | [[Category: | + | [[Category: Tarafder AK]] |
| - | [[Category: | + | [[Category: Von Kugelgen A]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Cryo-EM structure of Pf4 bacteriophage coat protein with single-stranded DNA
| |||||||||
