1n03
From Proteopedia
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<SX load='1n03' size='340' side='right' viewer='molstar' caption='[[1n03]], [[Resolution|resolution]] 20.00Å' scene=''> | <SX load='1n03' size='340' side='right' viewer='molstar' caption='[[1n03]], [[Resolution|resolution]] 20.00Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[1n03]] is a 7 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[1n03]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N03 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1N03 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 20Å</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene></td></tr> |
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1n03 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1n03 OCA], [https://pdbe.org/1n03 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1n03 RCSB], [https://www.ebi.ac.uk/pdbsum/1n03 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1n03 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
- | [ | + | [https://www.uniprot.org/uniprot/RECA_ECOLI RECA_ECOLI] Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage.[HAMAP-Rule:MF_00268] |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1n03 ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1n03 ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
- | <div style="background-color:#fffaf0;"> | ||
- | == Publication Abstract from PubMed == | ||
- | The crystal structure of the E. coli RecA protein was solved more than 10 years ago, but it has provided limited insight into the mechanism of homologous genetic recombination. Using electron microscopy, we have reconstructed five different states of RecA-DNA filaments. The C-terminal lobe of the RecA protein is modulated by the state of the distantly bound nucleotide, and this allosteric coupling can explain how mutations and truncations of this C-terminal lobe enhance RecA's activity. A model generated from these reconstructions shows that the nucleotide binding core is substantially rotated from its position in the RecA crystal filament, resulting in ATP binding between subunits. This simple rotation can explain the large cooperativity in ATP hydrolysis observed for RecA-DNA filaments. | ||
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- | ATP-mediated conformational changes in the RecA filament.,VanLoock MS, Yu X, Yang S, Lai AL, Low C, Campbell MJ, Egelman EH Structure. 2003 Feb;11(2):187-96. PMID:12575938<ref>PMID:12575938</ref> | ||
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- | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
- | </div> | ||
- | <div class="pdbe-citations 1n03" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
- | *[[ | + | *[[3D structures of recombinase A|3D structures of recombinase A]] |
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__TOC__ | __TOC__ | ||
</SX> | </SX> | ||
[[Category: Escherichia coli]] | [[Category: Escherichia coli]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Campbell | + | [[Category: Campbell MJ]] |
- | [[Category: Egelman | + | [[Category: Egelman EH]] |
- | [[Category: Lai | + | [[Category: Lai AL]] |
- | [[Category: Low | + | [[Category: Low C]] |
- | [[Category: VanLoock | + | [[Category: VanLoock MS]] |
- | [[Category: Yang | + | [[Category: Yang S]] |
- | [[Category: Yu | + | [[Category: Yu X]] |
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Current revision
Model for Active RecA Filament
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Categories: Escherichia coli | Large Structures | Campbell MJ | Egelman EH | Lai AL | Low C | VanLoock MS | Yang S | Yu X