This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5a9k

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:38, 9 May 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 3: Line 3:
<SX load='5a9k' size='340' side='right' viewer='molstar' caption='[[5a9k]], [[Resolution|resolution]] 19.00&Aring;' scene=''>
<SX load='5a9k' size='340' side='right' viewer='molstar' caption='[[5a9k]], [[Resolution|resolution]] 19.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5a9k]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Bovine_papillomavirus Bovine papillomavirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5A9K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5A9K FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5a9k]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Bovine_papillomavirus Bovine papillomavirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5A9K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5A9K FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 19&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5a9l|5a9l]], [[5a9m|5a9m]], [[5a9n|5a9n]], [[5a9o|5a9o]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA_helicase DNA helicase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.4.12 3.6.4.12] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5a9k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5a9k OCA], [https://pdbe.org/5a9k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5a9k RCSB], [https://www.ebi.ac.uk/pdbsum/5a9k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5a9k ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5a9k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5a9k OCA], [http://pdbe.org/5a9k PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5a9k RCSB], [http://www.ebi.ac.uk/pdbsum/5a9k PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5a9k ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/VE1_BPV1 VE1_BPV1]] ATP-dependent DNA helicase required for initiation of viral DNA replication. It forms a complex with the viral E2 protein. The E1-E2 complex binds to the replication origin which contains binding sites for both proteins.
+
[https://www.uniprot.org/uniprot/VE1_BPV1 VE1_BPV1] ATP-dependent DNA helicase required for initiation of viral DNA replication. It forms a complex with the viral E2 protein. The E1-E2 complex binds to the replication origin which contains binding sites for both proteins.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 20: Line 19:
</div>
</div>
<div class="pdbe-citations 5a9k" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5a9k" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Helicase 3D structures|Helicase 3D structures]]
 +
*[[Replication protein E1|Replication protein E1]]
== References ==
== References ==
<references/>
<references/>
Line 25: Line 28:
</SX>
</SX>
[[Category: Bovine papillomavirus]]
[[Category: Bovine papillomavirus]]
-
[[Category: DNA helicase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Antson, F]]
+
[[Category: Antson F]]
-
[[Category: Chaban, Y]]
+
[[Category: Chaban Y]]
-
[[Category: Lamber, K]]
+
[[Category: Lamber K]]
-
[[Category: Orlova, E V]]
+
[[Category: Orlova EV]]
-
[[Category: Ryzhenkova, K]]
+
[[Category: Ryzhenkova K]]
-
[[Category: Sanders, C M]]
+
[[Category: Sanders CM]]
-
[[Category: Stead, J A]]
+
[[Category: Stead JA]]
-
[[Category: Whelan, F]]
+
[[Category: Whelan F]]
-
[[Category: Dna replication fork]]
+
-
[[Category: Hydrolase]]
+

Current revision

Structural basis for DNA strand separation by a hexameric replicative helicase

5a9k, resolution 19.00Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5a9k"
Personal tools