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| <StructureSection load='5bnf' size='340' side='right'caption='[[5bnf]], [[Resolution|resolution]] 2.30Å' scene=''> | | <StructureSection load='5bnf' size='340' side='right'caption='[[5bnf]], [[Resolution|resolution]] 2.30Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[5bnf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pig Pig]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BNF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5BNF FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5bnf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BNF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5BNF FirstGlance]. <br> |
- | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5bni|5bni]]</td></tr> | + | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5bnf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5bnf OCA], [https://pdbe.org/5bnf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5bnf RCSB], [https://www.ebi.ac.uk/pdbsum/5bnf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5bnf ProSAT]</span></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CD38 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9823 PIG])</td></tr>
| + | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5bnf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5bnf OCA], [http://pdbe.org/5bnf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5bnf RCSB], [http://www.ebi.ac.uk/pdbsum/5bnf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5bnf ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/F1S5D9_PIG F1S5D9_PIG] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| </StructureSection> | | </StructureSection> |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Pig]] | + | [[Category: Sus scrofa]] |
- | [[Category: Graeff, R M]] | + | [[Category: Graeff RM]] |
- | [[Category: Hao, Q]] | + | [[Category: Hao Q]] |
- | [[Category: Kotaka, M]] | + | [[Category: Kotaka M]] |
- | [[Category: Lee, H C]] | + | [[Category: Lee HC]] |
- | [[Category: Leung, C P.F]] | + | [[Category: Leung CPF]] |
- | [[Category: Ting, K Y]] | + | [[Category: Ting KY]] |
- | [[Category: Adp-cyclase]]
| + | |
- | [[Category: Adp-hydrolase]]
| + | |
- | [[Category: Cadpr]]
| + | |
- | [[Category: Calcium signalling]]
| + | |
- | [[Category: Hydrolase]]
| + | |
| Structural highlights
Function
F1S5D9_PIG
Publication Abstract from PubMed
Cyclic ADP-ribose (cADPR) mobilizes intracellular Ca(2+) stores and activates Ca(2+) influx to regulate a wide range of physiological processes. It is one of the products produced from the catalysis of NAD(+) by the multifunctional CD38/ADP-ribosyl cyclase superfamily. After elimination of the nicotinamide ring by the enzyme, the reaction intermediate of NAD(+) can either be hydrolyzed to form linear ADPR or cyclized to form cADPR. We have previously shown that human CD38 exhibits a higher preference towards the hydrolysis of NAD(+) to form linear ADPR while Aplysia ADP-ribosyl cyclase prefers cyclizing NAD(+) to form cADPR. In this study, we characterized the enzymatic properties of porcine CD38 and revealed that it has a prominent secondary NAD(+) cyclase activity producing cADPR. We also determined the X-ray crystallographic structures of porcine CD38 and were able to observe conformational flexibility at the base of the active site of the enzyme which allow the NAD(+) reaction intermediate to adopt conformations resulting in both hydrolysis and cyclization forming linear ADPR and cADPR respectively.
Porcine CD38 exhibits prominent secondary NAD(+) cyclase activity.,Ting KY, Leung CF, Graeff RM, Lee HC, Hao Q, Kotaka M Protein Sci. 2016 Mar;25(3):650-61. doi: 10.1002/pro.2859. Epub 2016 Jan 12. PMID:26660500[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Ting KY, Leung CF, Graeff RM, Lee HC, Hao Q, Kotaka M. Porcine CD38 exhibits prominent secondary NAD(+) cyclase activity. Protein Sci. 2016 Mar;25(3):650-61. doi: 10.1002/pro.2859. Epub 2016 Jan 12. PMID:26660500 doi:http://dx.doi.org/10.1002/pro.2859
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