6vqg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:39, 6 March 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='6vqg' size='340' side='right'caption='[[6vqg]], [[Resolution|resolution]] 4.20&Aring;' scene=''>
<StructureSection load='6vqg' size='340' side='right'caption='[[6vqg]], [[Resolution|resolution]] 4.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6vqg]] is a 18 chain structure with sequence from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6VQG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6VQG FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6vqg]] is a 18 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6VQG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6VQG FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6vqg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6vqg OCA], [http://pdbe.org/6vqg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6vqg RCSB], [http://www.ebi.ac.uk/pdbsum/6vqg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6vqg ProSAT]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4.2&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6vqg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6vqg OCA], [https://pdbe.org/6vqg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6vqg RCSB], [https://www.ebi.ac.uk/pdbsum/6vqg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6vqg ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/Q5M7T6_RAT Q5M7T6_RAT]] Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.[PIRNR:PIRNR018497] [[http://www.uniprot.org/uniprot/VPP1_RAT VPP1_RAT]] Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle (By similarity). [[http://www.uniprot.org/uniprot/VA0E2_RAT VA0E2_RAT]] Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. [[http://www.uniprot.org/uniprot/VATL_RAT VATL_RAT]] Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (By similarity). [[http://www.uniprot.org/uniprot/VATF_RAT VATF_RAT]] Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. [[http://www.uniprot.org/uniprot/RENR_RAT RENR_RAT]] Multifunctional protein which functions as a renin, prorenin cellular receptor and is involved in the assembly of the proton-transporting vacuolar (V)-ATPase protein pump. May mediate renin-dependent cellular responses by activating ERK1 and ERK2. By increasing the catalytic efficiency of renin in AGT/angiotensinogen conversion to angiotensin I, it may also play a role in the renin-angiotensin system (RAS) (By similarity). Probably by controlling the assembly of the V-ATPase pump and thus the acidification of the endo-lysosomal system, plays a role in many neuronal processes including synapse morphology and synaptic transmission (By similarity).[UniProtKB:O75787][UniProtKB:Q9CYN9] [[http://www.uniprot.org/uniprot/VAS1_RAT VAS1_RAT]] Accessory subunit of the proton-transporting vacuolar (V)-ATPase protein pump, which is required for luminal acidification of secretory vesicles. Guides the V-type ATPase into specialized subcellular compartments, such as neuroendocrine regulated secretory vesicles or the ruffled border of the osteoclast, thereby regulating its activity. Involved in membrane trafficking and Ca(2+)-dependent membrane fusion. May play a role in the assembly of the V-type ATPase complex. In aerobic conditions, involved in intracellular iron homeostasis, thus triggering the activity of Fe(2+) prolyl hydroxylase (PHD) enzymes, and leading to HIF1A hydroxylation and subsequent proteasomal degradation (By similarity).[UniProtKB:Q15904]
+
[https://www.uniprot.org/uniprot/Q6P503_RAT Q6P503_RAT]
 +
 
 +
==See Also==
 +
*[[ATPase 3D structures|ATPase 3D structures]]
 +
*[[Ribonuclease 3D structures|Ribonuclease 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Rattus norvegicus]]
[[Category: Rattus norvegicus]]
-
[[Category: Abbas, Y M]]
+
[[Category: Abbas YM]]
-
[[Category: Rubinstein, J L]]
+
[[Category: Rubinstein JL]]
-
[[Category: Membrane protein complex]]
+
-
[[Category: Proton transport]]
+
-
[[Category: Rotary atpase]]
+

Current revision

Mammalian V-ATPase from rat brain membrane-embedded Vo region rotational state 2 (from focused refinement)

PDB ID 6vqg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools