This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5bvn
From Proteopedia
(Difference between revisions)
| (One intermediate revision not shown.) | |||
| Line 3: | Line 3: | ||
<StructureSection load='5bvn' size='340' side='right'caption='[[5bvn]], [[Resolution|resolution]] 2.21Å' scene=''> | <StructureSection load='5bvn' size='340' side='right'caption='[[5bvn]], [[Resolution|resolution]] 2.21Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5bvn]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[5bvn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BVN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5BVN FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=4VD:N-[5-({[(3-FLUOROPHENYL)CARBAMOYL]AMINO}METHYL)-2-METHYLPHENYL]IMIDAZO[1,2-A]PYRIDINE-3-CARBOXAMIDE'>4VD</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.21Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4VD:N-[5-({[(3-FLUOROPHENYL)CARBAMOYL]AMINO}METHYL)-2-METHYLPHENYL]IMIDAZO[1,2-A]PYRIDINE-3-CARBOXAMIDE'>4VD</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5bvn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5bvn OCA], [https://pdbe.org/5bvn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5bvn RCSB], [https://www.ebi.ac.uk/pdbsum/5bvn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5bvn ProSAT]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/DDR1_HUMAN DDR1_HUMAN] | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 25: | Line 26: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Homo sapiens]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | + | [[Category: Berdini V]] | |
| - | [[Category: Berdini | + | [[Category: Buck I]] |
| - | [[Category: Buck | + | [[Category: Carr M]] |
| - | [[Category: Carr | + | [[Category: Cleasby A]] |
| - | [[Category: Cleasby | + | [[Category: Coyle J]] |
| - | [[Category: Coyle | + | [[Category: Curry J]] |
| - | [[Category: Curry | + | [[Category: Day J]] |
| - | [[Category: Day | + | [[Category: Hearn K]] |
| - | [[Category: Hearn | + | [[Category: Iqbal A]] |
| - | [[Category: Iqbal | + | [[Category: Kirsten T]] |
| - | [[Category: Kirsten | + | [[Category: Lee L]] |
| - | [[Category: Lee | + | [[Category: Martins V]] |
| - | [[Category: Martins | + | [[Category: Mortenson P]] |
| - | [[Category: Mortenson | + | [[Category: Munck J]] |
| - | [[Category: Munck | + | [[Category: Murray C]] |
| - | [[Category: Murray | + | [[Category: Page L]] |
| - | [[Category: Page | + | [[Category: Patel S]] |
| - | [[Category: Patel | + | [[Category: Roomans S]] |
| - | [[Category: Roomans | + | [[Category: Saxty G]] |
| - | [[Category: Saxty | + | |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Fragment-based discovery of potent and selective DDR1/2 inhibitors
| |||||||||||
