2g9d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:02, 30 October 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='2g9d' size='340' side='right'caption='[[2g9d]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
<StructureSection load='2g9d' size='340' side='right'caption='[[2g9d]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2g9d]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibco Vibco]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G9D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2G9D FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2g9d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_MO10 Vibrio cholerae MO10]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G9D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G9D FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2g9d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g9d OCA], [http://pdbe.org/2g9d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2g9d RCSB], [http://www.ebi.ac.uk/pdbsum/2g9d PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2g9d ProSAT], [http://www.topsan.org/Proteins/NESGC/2g9d TOPSAN]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g9d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g9d OCA], [https://pdbe.org/2g9d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g9d RCSB], [https://www.ebi.ac.uk/pdbsum/2g9d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g9d ProSAT], [https://www.topsan.org/Proteins/NESGC/2g9d TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/ASTE_VIBCH ASTE_VIBCH]] Transforms N(2)-succinylglutamate into succinate and glutamate (By similarity).
+
[https://www.uniprot.org/uniprot/ASTE_VIBCH ASTE_VIBCH] Transforms N(2)-succinylglutamate into succinate and glutamate (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 14: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g9/2g9d_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g9/2g9d_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 22: Line 23:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Vibco]]
+
[[Category: Vibrio cholerae MO10]]
-
[[Category: Acton, T B]]
+
[[Category: Acton TB]]
-
[[Category: Conover, K]]
+
[[Category: Conover K]]
-
[[Category: Forouhar, F]]
+
[[Category: Forouhar F]]
-
[[Category: Hunt, J F]]
+
[[Category: Hunt JF]]
-
[[Category: Jayaraman, S]]
+
[[Category: Jayaraman S]]
-
[[Category: Montelione, G T]]
+
[[Category: Montelione GT]]
-
[[Category: Structural genomic]]
+
[[Category: Rong X]]
-
[[Category: Rong, X]]
+
[[Category: Tong L]]
-
[[Category: Tong, L]]
+
[[Category: Zhou W]]
-
[[Category: Zhou, W]]
+
-
[[Category: Alpha-beta protein]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Nesg]]
+
-
[[Category: PSI, Protein structure initiative]]
+

Current revision

Crystal Structure of Succinylglutamate desuccinylase from Vibrio cholerae, Northeast Structural Genomics Target VcR20

PDB ID 2g9d

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools