5d51

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<StructureSection load='5d51' size='340' side='right'caption='[[5d51]], [[Resolution|resolution]] 1.47&Aring;' scene=''>
<StructureSection load='5d51' size='340' side='right'caption='[[5d51]], [[Resolution|resolution]] 1.47&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5d51]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_17697_[[alcaligenes_eutrophus]] Atcc 17697 [[alcaligenes eutrophus]]]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5D51 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5D51 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5d51]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cupriavidus_necator Cupriavidus necator]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5D51 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5D51 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=F3S:FE3-S4+CLUSTER'>F3S</scene>, <scene name='pdbligand=F4S:FE4-S3+CLUSTER'>F4S</scene>, <scene name='pdbligand=KR:KRYPTON'>KR</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NFV:NI-FE+OXIDIZED+ACTIVE+CENTER'>NFV</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.47&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">hoxG, PHG002 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=106590 ATCC 17697 [[Alcaligenes eutrophus]]]), hoxK, PHG001 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=106590 ATCC 17697 [[Alcaligenes eutrophus]]])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=F3S:FE3-S4+CLUSTER'>F3S</scene>, <scene name='pdbligand=F4S:FE4-S3+CLUSTER'>F4S</scene>, <scene name='pdbligand=KR:KRYPTON'>KR</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NFV:NI-FE+OXIDIZED+ACTIVE+CENTER'>NFV</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Hydrogenase_(acceptor) Hydrogenase (acceptor)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.12.99.6 1.12.99.6] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5d51 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5d51 OCA], [https://pdbe.org/5d51 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5d51 RCSB], [https://www.ebi.ac.uk/pdbsum/5d51 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5d51 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5d51 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5d51 OCA], [http://pdbe.org/5d51 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5d51 RCSB], [http://www.ebi.ac.uk/pdbsum/5d51 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5d51 ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/MBHL_CUPNH MBHL_CUPNH]] This enzyme recycles the H(2) produced by nitrogenase to increase the production of ATP and to protect nitrogenase against inhibition or damage by O(2) under carbon- or phosphate-limited conditions. [[http://www.uniprot.org/uniprot/MBHS_CUPNH MBHS_CUPNH]] This enzyme recycles the H(2) produced by nitrogenase to increase the production of ATP and to protect nitrogenase against inhibition or damage by O(2) under carbon- or phosphate-limited conditions.
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[https://www.uniprot.org/uniprot/MBHL_CUPNH MBHL_CUPNH] This enzyme recycles the H(2) produced by nitrogenase to increase the production of ATP and to protect nitrogenase against inhibition or damage by O(2) under carbon- or phosphate-limited conditions.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Cupriavidus necator]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Carpentier, P]]
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[[Category: Carpentier P]]
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[[Category: Frielingsdorf, S]]
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[[Category: Frielingsdorf S]]
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[[Category: Kalms, J]]
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[[Category: Kalms J]]
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[[Category: Lenz, O]]
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[[Category: Lenz O]]
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[[Category: Linden, P van der]]
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[[Category: Scheerer P]]
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[[Category: Scheerer, P]]
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[[Category: Schmidt A]]
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[[Category: Schmidt, A]]
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[[Category: Van der Linden P]]
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[[Category: Stetten, D von]]
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[[Category: Von Stetten D]]
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[[Category: Aerobic hydrogen bacteria]]
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[[Category: Bimetallic]]
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[[Category: Dehydrogenase]]
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[[Category: Dihydrogen]]
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[[Category: Gas transport]]
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[[Category: Hydrogen]]
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[[Category: Hydrogen catalysis]]
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[[Category: Hydrophobic tunnel]]
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[[Category: Iron-sulfur cluster]]
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[[Category: Knallgasbacteria]]
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[[Category: Krypton]]
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[[Category: Membrane-bound]]
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[[Category: Metalloenzyme]]
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[[Category: Metalloprotein catalytic center]]
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[[Category: Ni-fe active site]]
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[[Category: Nickel-iron cofactor]]
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[[Category: Noble gas derivatization]]
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[[Category: Oxidized state]]
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[[Category: Oxidoreductase]]
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[[Category: Oxygen-tolerant hydrogenase]]
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[[Category: Proteobacteria]]
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[[Category: T-cluster]]
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Current revision

Krypton derivatization of an O2-tolerant membrane-bound [NiFe] hydrogenase reveals a hydrophobic gas tunnel network

PDB ID 5d51

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OCA

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