This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
6w3w
From Proteopedia
(Difference between revisions)
| (2 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | == | + | ==An enumerative algorithm for de novo design of proteins with diverse pocket structures== |
<StructureSection load='6w3w' size='340' side='right'caption='[[6w3w]], [[Resolution|resolution]] 1.55Å' scene=''> | <StructureSection load='6w3w' size='340' side='right'caption='[[6w3w]], [[Resolution|resolution]] 1.55Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[6w3w]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6W3W OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[6w3w]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6W3W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6W3W FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55Å</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6w3w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6w3w OCA], [https://pdbe.org/6w3w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6w3w RCSB], [https://www.ebi.ac.uk/pdbsum/6w3w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6w3w ProSAT]</span></td></tr> | ||
</table> | </table> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Baker | + | [[Category: Synthetic construct]] |
| - | [[Category: Basanta | + | [[Category: Baker D]] |
| - | [[Category: Bera | + | [[Category: Basanta B]] |
| - | [[Category: Dimaio | + | [[Category: Bera AK]] |
| - | [[Category: Sankaran | + | [[Category: Dimaio F]] |
| - | + | [[Category: Sankaran B]] | |
| - | + | ||
| - | + | ||
Current revision
An enumerative algorithm for de novo design of proteins with diverse pocket structures
| |||||||||||
