6y6k
From Proteopedia
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<StructureSection load='6y6k' size='340' side='right'caption='[[6y6k]], [[Resolution|resolution]] 3.78Å' scene=''> | <StructureSection load='6y6k' size='340' side='right'caption='[[6y6k]], [[Resolution|resolution]] 3.78Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[6y6k]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6Y6K OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[6y6k]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/SFTS_virus_AH12 SFTS virus AH12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6Y6K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6Y6K FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.78Å</td></tr> |
- | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6y6k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6y6k OCA], [https://pdbe.org/6y6k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6y6k RCSB], [https://www.ebi.ac.uk/pdbsum/6y6k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6y6k ProSAT]</span></td></tr> |
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/L_SFTS L_SFTS] | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
- | + | The Bunyavirales order contains several emerging viruses with high epidemic potential, including Severe fever with thrombocytopenia syndrome virus (SFTSV). The lack of medical countermeasures, such as vaccines and antivirals, is a limiting factor for the containment of any virus outbreak. To develop such antivirals a profound understanding of the viral replication process is essential. The L protein of bunyaviruses is a multi-functional and multi-domain protein performing both virus transcription and genome replication and, therefore, is an ideal drug target. We established expression and purification procedures for the full-length L protein of SFTSV. By combining single-particle electron cryo-microscopy and X-ray crystallography, we obtained 3D models covering approximately 70% of the SFTSV L protein in the apo-conformation including the polymerase core region, the endonuclease and the cap-binding domain. We compared this first L structure of the Phenuiviridae family to the structures of La Crosse peribunyavirus L protein and influenza orthomyxovirus polymerase. Together with a comprehensive biochemical characterization of the distinct functions of SFTSV L protein, this work provides a solid framework for future structural and functional studies of L protein-RNA interactions and the development of antiviral strategies against this group of emerging human pathogens. | |
- | + | Structural and functional characterization of the severe fever with thrombocytopenia syndrome virus L protein.,Vogel D, Thorkelsson SR, Quemin ERJ, Meier K, Kouba T, Gogrefe N, Busch C, Reindl S, Gunther S, Cusack S, Grunewald K, Rosenthal M Nucleic Acids Res. 2020 Apr 20. pii: 5822961. doi: 10.1093/nar/gkaa253. PMID:32313945<ref>PMID:32313945</ref> | |
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Busch | + | [[Category: SFTS virus AH12]] |
- | [[Category: Cusack | + | [[Category: Busch C]] |
- | [[Category: Gogrefe | + | [[Category: Cusack S]] |
- | [[Category: Gruenewald | + | [[Category: Gogrefe N]] |
- | [[Category: Guenther | + | [[Category: Gruenewald K]] |
- | [[Category: Kouba | + | [[Category: Guenther S]] |
- | [[Category: Meier | + | [[Category: Kouba T]] |
- | [[Category: Quemin | + | [[Category: Meier K]] |
- | [[Category: Reindl | + | [[Category: Quemin E]] |
- | [[Category: Rosenthal | + | [[Category: Reindl S]] |
- | [[Category: Thorkelsson | + | [[Category: Rosenthal M]] |
- | [[Category: Vogel | + | [[Category: Thorkelsson SR]] |
- | + | [[Category: Vogel D]] | |
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Current revision
Cryo-EM structure of a Phenuiviridae L protein
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Categories: Large Structures | SFTS virus AH12 | Busch C | Cusack S | Gogrefe N | Gruenewald K | Guenther S | Kouba T | Meier K | Quemin E | Reindl S | Rosenthal M | Thorkelsson SR | Vogel D