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5dor

From Proteopedia

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Current revision (21:53, 28 June 2023) (edit) (undo)
 
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<StructureSection load='5dor' size='340' side='right'caption='[[5dor]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
<StructureSection load='5dor' size='340' side='right'caption='[[5dor]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5dor]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bpp2 Bpp2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DOR OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5DOR FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5dor]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_P2 Escherichia virus P2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DOR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5DOR FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5c6k|5c6k]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">int ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10679 BPP2])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5dor FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dor OCA], [https://pdbe.org/5dor PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5dor RCSB], [https://www.ebi.ac.uk/pdbsum/5dor PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5dor ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5dor FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dor OCA], [http://pdbe.org/5dor PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5dor RCSB], [http://www.ebi.ac.uk/pdbsum/5dor PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5dor ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/VINT_BPP2 VINT_BPP2]] Integrase is necessary for integration of the phage into the host genome by site-specific recombination.
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[https://www.uniprot.org/uniprot/VINT_BPP2 VINT_BPP2] Integrase is necessary for integration of the phage into the host genome by site-specific recombination.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bpp2]]
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[[Category: Escherichia virus P2]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Claesson, M]]
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[[Category: Claesson M]]
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[[Category: Haggard-Ljungquist, E]]
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[[Category: Haggard-Ljungquist E]]
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[[Category: Hogbom, M]]
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[[Category: Hogbom M]]
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[[Category: Odegrip, R]]
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[[Category: Odegrip R]]
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[[Category: Skaar, K]]
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[[Category: Skaar K]]
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[[Category: Hydrolase]]
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[[Category: Integrase]]
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[[Category: Tyrosine recombinase]]
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Current revision

P2 Integrase catalytic domain in space group P21

PDB ID 5dor

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