This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5lkh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:31, 18 October 2023) (edit) (undo)
 
Line 3: Line 3:
<SX load='5lkh' size='340' side='right' viewer='molstar' caption='[[5lkh]], [[Resolution|resolution]] 3.46&Aring;' scene=''>
<SX load='5lkh' size='340' side='right' viewer='molstar' caption='[[5lkh]], [[Resolution|resolution]] 3.46&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5lkh]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_29999 Atcc 29999]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LKH OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5LKH FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5lkh]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Photorhabdus_luminescens Photorhabdus luminescens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LKH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5LKH FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5lki|5lki]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.46&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tcdA, tcdA1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=29488 ATCC 29999])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5lkh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lkh OCA], [https://pdbe.org/5lkh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5lkh RCSB], [https://www.ebi.ac.uk/pdbsum/5lkh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5lkh ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5lkh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lkh OCA], [http://pdbe.org/5lkh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5lkh RCSB], [http://www.ebi.ac.uk/pdbsum/5lkh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5lkh ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9RN43_PHOLU Q9RN43_PHOLU]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 22:
__TOC__
__TOC__
</SX>
</SX>
-
[[Category: Atcc 29999]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Gatsogiannis, C]]
+
[[Category: Photorhabdus luminescens]]
-
[[Category: Leidreiter, F]]
+
[[Category: Gatsogiannis C]]
-
[[Category: Merino, F]]
+
[[Category: Leidreiter F]]
-
[[Category: Meusch, D]]
+
[[Category: Merino F]]
-
[[Category: Prumbaum, D]]
+
[[Category: Meusch D]]
-
[[Category: Raunser, S]]
+
[[Category: Prumbaum D]]
-
[[Category: Roderer, D]]
+
[[Category: Raunser S]]
-
[[Category: Injection]]
+
[[Category: Roderer D]]
-
[[Category: Nanodisc]]
+
-
[[Category: Pore-forming]]
+
-
[[Category: Toxin]]
+

Current revision

Cryo-EM structure of the Tc toxin TcdA1 in its pore state (obtained by flexible fitting)

5lkh, resolution 3.46Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools