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6rdk

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Current revision (10:10, 22 May 2024) (edit) (undo)
 
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<SX load='6rdk' size='340' side='right' viewer='molstar' caption='[[6rdk]], [[Resolution|resolution]] 3.70&Aring;' scene=''>
<SX load='6rdk' size='340' side='right' viewer='molstar' caption='[[6rdk]], [[Resolution|resolution]] 3.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6rdk]] is a 30 chain structure with sequence from [http://en.wikipedia.org/wiki/Polytomella_sp._pringsheim_198.80 Polytomella sp. pringsheim 198.80]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RDK OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6RDK FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6rdk]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Polytomella_sp._Pringsheim_198.80 Polytomella sp. Pringsheim 198.80]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RDK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6RDK FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.7&#8491;</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/H(+)-transporting_two-sector_ATPase H(+)-transporting two-sector ATPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=7.1.2.2 7.1.2.2] </span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6rdk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rdk OCA], [http://pdbe.org/6rdk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6rdk RCSB], [http://www.ebi.ac.uk/pdbsum/6rdk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6rdk ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6rdk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rdk OCA], [https://pdbe.org/6rdk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6rdk RCSB], [https://www.ebi.ac.uk/pdbsum/6rdk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6rdk ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/A0ZW40_9CHLO A0ZW40_9CHLO]] Produces ATP from ADP in the presence of a proton gradient across the membrane.[RuleBase:RU003551] [[http://www.uniprot.org/uniprot/A0ZW41_9CHLO A0ZW41_9CHLO]] Produces ATP from ADP in the presence of a proton gradient across the membrane.[RuleBase:RU003553]
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[https://www.uniprot.org/uniprot/A0A5H1ZR95_9CHLO A0A5H1ZR95_9CHLO]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 6rdk" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6rdk" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[ATPase 3D structures|ATPase 3D structures]]
== References ==
== References ==
<references/>
<references/>
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</SX>
</SX>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Polytomella sp. pringsheim 198 80]]
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[[Category: Polytomella sp. Pringsheim 198 80]]
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[[Category: Klusch, N]]
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[[Category: Klusch N]]
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[[Category: Kuhlbrandt, W]]
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[[Category: Kuhlbrandt W]]
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[[Category: Murphy, B J]]
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[[Category: Murphy BJ]]
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[[Category: Yildiz, O]]
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[[Category: Yildiz O]]
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[[Category: Mitochondrial atp synthase dimer flexible coupling cryoem]]
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[[Category: Proton transport]]
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Current revision

Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1B, composite map

6rdk, resolution 3.70Å

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