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6rvr

From Proteopedia

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Current revision (10:13, 22 May 2024) (edit) (undo)
 
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<SX load='6rvr' size='340' side='right' viewer='molstar' caption='[[6rvr]], [[Resolution|resolution]] 3.46&Aring;' scene=''>
<SX load='6rvr' size='340' side='right' viewer='molstar' caption='[[6rvr]], [[Resolution|resolution]] 3.46&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6rvr]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Ebvg Ebvg]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RVR OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6RVR FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6rvr]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_gammaherpesvirus_4 Human gammaherpesvirus 4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RVR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6RVR FirstGlance]. <br>
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</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BBRF1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10376 EBVG])</td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.46&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6rvr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rvr OCA], [http://pdbe.org/6rvr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6rvr RCSB], [http://www.ebi.ac.uk/pdbsum/6rvr PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6rvr ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6rvr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rvr OCA], [https://pdbe.org/6rvr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6rvr RCSB], [https://www.ebi.ac.uk/pdbsum/6rvr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6rvr ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/A0A0B6VPI0_EBVG A0A0B6VPI0_EBVG]] Forms a portal in the viral capsid through which viral DNA is translocated during DNA packaging. Assembles as a dodecamer at a single fivefold axe of the T=16 icosahedric capsid. Binds to the molecular motor that translocates the viral DNA, termed terminase.[HAMAP-Rule:MF_04012]
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[https://www.uniprot.org/uniprot/PORTL_EBVG PORTL_EBVG] Forms a portal in the viral capsid through which viral DNA is translocated during DNA packaging. Assembles as a dodecamer at a single fivefold axe of the T=16 icosahedric capsid. Binds to the molecular motor that translocates the viral DNA, termed terminase.[HAMAP-Rule:MF_04012]
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<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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==See Also==
==See Also==
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*[[Portal protein|Portal protein]]
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*[[Portal protein 3D structures|Portal protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</SX>
</SX>
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[[Category: Ebvg]]
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[[Category: Human gammaherpesvirus 4]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Carrascosa, J L]]
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[[Category: Carrascosa JL]]
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[[Category: Coll, M]]
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[[Category: Coll M]]
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[[Category: Cuervo, A]]
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[[Category: Cuervo A]]
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[[Category: Fabrega-Ferrer, M]]
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[[Category: Fabrega-Ferrer M]]
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[[Category: Machon, C]]
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[[Category: Machon C]]
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[[Category: Stuart, D I]]
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[[Category: Stuart DI]]
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[[Category: Zhou, D]]
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[[Category: Zhou D]]
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[[Category: Dna packaging]]
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[[Category: Viral protein]]
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Current revision

Atomic structure of the Epstein-Barr portal, structure I

6rvr, resolution 3.46Å

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OCA

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