This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
6v11
From Proteopedia
(Difference between revisions)
| (One intermediate revision not shown.) | |||
| Line 3: | Line 3: | ||
<SX load='6v11' size='340' side='right' viewer='molstar' caption='[[6v11]], [[Resolution|resolution]] 3.80Å' scene=''> | <SX load='6v11' size='340' side='right' viewer='molstar' caption='[[6v11]], [[Resolution|resolution]] 3.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[6v11]] is a 6 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[6v11]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pestis Yersinia pestis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6V11 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6V11 FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.8Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene></td></tr> | |
| - | <tr id=' | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6v11 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6v11 OCA], [https://pdbe.org/6v11 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6v11 RCSB], [https://www.ebi.ac.uk/pdbsum/6v11 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6v11 ProSAT]</span></td></tr> |
| - | + | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/A0A5P8YJ65_YERPE A0A5P8YJ65_YERPE] ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.[HAMAP-Rule:MF_01973] | ||
__TOC__ | __TOC__ | ||
</SX> | </SX> | ||
| - | [[Category: Endopeptidase La]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Adjei | + | [[Category: Yersinia pestis]] |
| - | [[Category: Asmita | + | [[Category: Adjei E]] |
| - | [[Category: Karzai | + | [[Category: Asmita A]] |
| - | [[Category: Lander | + | [[Category: Karzai AW]] |
| - | [[Category: Puchades | + | [[Category: Lander GC]] |
| - | [[Category: Puri | + | [[Category: Puchades C]] |
| - | [[Category: Shin | + | [[Category: Puri N]] |
| - | [[Category: Wiseman | + | [[Category: Shin M]] |
| - | + | [[Category: Wiseman RL]] | |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Lon Protease from Yersinia pestis
| |||||||||
Categories: Large Structures | Yersinia pestis | Adjei E | Asmita A | Karzai AW | Lander GC | Puchades C | Puri N | Shin M | Wiseman RL
