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| ==Double dockerin from Piromyces equi Cel45A== | | ==Double dockerin from Piromyces equi Cel45A== |
- | <StructureSection load='2j4m' size='340' side='right'caption='[[2j4m]], [[NMR_Ensembles_of_Models | 6 NMR models]]' scene=''> | + | <StructureSection load='2j4m' size='340' side='right'caption='[[2j4m]]' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[2j4m]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pireq Pireq]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J4M OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2J4M FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[2j4m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Piromyces_sp._'equi' Piromyces sp. 'equi']. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J4M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2J4M FirstGlance]. <br> |
- | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1e8p|1e8p]], [[1e8q|1e8q]], [[2j4n|2j4n]]</td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 6 models</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2j4m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j4m OCA], [http://pdbe.org/2j4m PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2j4m RCSB], [http://www.ebi.ac.uk/pdbsum/2j4m PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2j4m ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2j4m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j4m OCA], [https://pdbe.org/2j4m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2j4m RCSB], [https://www.ebi.ac.uk/pdbsum/2j4m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2j4m ProSAT]</span></td></tr> |
| </table> | | </table> |
| == Evolutionary Conservation == | | == Evolutionary Conservation == |
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| <jmolCheckbox> | | <jmolCheckbox> |
| <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j4/2j4m_consurf.spt"</scriptWhenChecked> | | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j4/2j4m_consurf.spt"</scriptWhenChecked> |
- | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
| <text>to colour the structure by Evolutionary Conservation</text> | | <text>to colour the structure by Evolutionary Conservation</text> |
| </jmolCheckbox> | | </jmolCheckbox> |
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| </StructureSection> | | </StructureSection> |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Pireq]] | + | [[Category: Piromyces sp. 'equi']] |
- | [[Category: Gilbert, H J]] | + | [[Category: Gilbert HJ]] |
- | [[Category: Higgins, L D]] | + | [[Category: Higgins LD]] |
- | [[Category: Nagy, T]] | + | [[Category: Nagy T]] |
- | [[Category: Tunnicliffe, R B]] | + | [[Category: Tunnicliffe RB]] |
- | [[Category: Walters, C]] | + | [[Category: Walters C]] |
- | [[Category: Williamson, M P]] | + | [[Category: Williamson MP]] |
- | [[Category: Cellulosome]]
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- | [[Category: Dockerin]]
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- | [[Category: Protein binding]]
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- | [[Category: Small cysteine-rich]]
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| Structural highlights
Evolutionary Conservation
Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
Publication Abstract from PubMed
The assembly into supramolecular complexes of proteins having complementary activities is central to cellular function. One such complex of considerable biological and industrial significance is the plant cell wall-degrading apparatus of anaerobic microorganisms, termed the cellulosome. A central feature of bacterial cellulosomes is a large non-catalytic protein, the scaffoldin, which contains multiple cohesin domains. An array of digestive enzymes is incorporated into the cellulosome through the interaction of the dockerin domains, present in the catalytic subunits, with the cohesin domains that are present in the scaffoldin. By contrast, in anaerobic fungi, such as Piromyces equi, the dockerins of cellulosomal enzymes are often present in tandem copies; however, the identity of the cognate cohesin domains in these organisms is unclear, hindering further biotechnological development of the fungal cellulosome. Here, we characterise the solution structure and function of a double-dockerin construct from the P. equi endoglucanase Cel45A. We show that the two domains are connected by a flexible linker that is short enough to keep the binding sites of the two domains on adjacent surfaces, and allows the double-dockerin construct to bind more tightly to cellulosomes than a single domain and with greater coverage. The double dockerin binds to the GH3 beta-glucosidase component of the fungal cellulosome, which is thereby identified as a potential scaffoldin.
Characterization of a double dockerin from the cellulosome of the anaerobic fungus Piromyces equi.,Nagy T, Tunnicliffe RB, Higgins LD, Walters C, Gilbert HJ, Williamson MP J Mol Biol. 2007 Oct 26;373(3):612-22. Epub 2007 Aug 19. PMID:17869267[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Nagy T, Tunnicliffe RB, Higgins LD, Walters C, Gilbert HJ, Williamson MP. Characterization of a double dockerin from the cellulosome of the anaerobic fungus Piromyces equi. J Mol Biol. 2007 Oct 26;373(3):612-22. Epub 2007 Aug 19. PMID:17869267 doi:http://dx.doi.org/10.1016/j.jmb.2007.08.007
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