5o9w

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Current revision (09:38, 6 December 2023) (edit) (undo)
 
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<StructureSection load='5o9w' size='340' side='right'caption='[[5o9w]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
<StructureSection load='5o9w' size='340' side='right'caption='[[5o9w]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5o9w]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Opium_poppy Opium poppy]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5O9W OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5O9W FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5o9w]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Papaver_somniferum Papaver somniferum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5O9W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5O9W FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AKG:2-OXOGLUTARIC+ACID'>AKG</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5o7y|5o7y]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AKG:2-OXOGLUTARIC+ACID'>AKG</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">T6ODM, DIOX1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3469 Opium poppy])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5o9w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5o9w OCA], [https://pdbe.org/5o9w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5o9w RCSB], [https://www.ebi.ac.uk/pdbsum/5o9w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5o9w ProSAT]</span></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Thebaine_6-O-demethylase Thebaine 6-O-demethylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.11.31 1.14.11.31] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5o9w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5o9w OCA], [http://pdbe.org/5o9w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5o9w RCSB], [http://www.ebi.ac.uk/pdbsum/5o9w PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5o9w ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/DIOX1_PAPSO DIOX1_PAPSO]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Opium poppy]]
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[[Category: Papaver somniferum]]
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[[Category: Thebaine 6-O-demethylase]]
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[[Category: Borowski T]]
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[[Category: Borowski, T]]
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[[Category: Kluza A]]
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[[Category: Kluza, A]]
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[[Category: Kurpiewska K]]
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[[Category: Kurpiewska, K]]
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[[Category: Niedzialkowska E]]
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[[Category: Niedzialkowska, E]]
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[[Category: Porebski PJ]]
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[[Category: Porebski, P J]]
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[[Category: 2-oxoglutarate dependent dioxygenase]]
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[[Category: Morphine biosynthesis]]
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[[Category: Oripavine]]
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[[Category: Oxidoreductase]]
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[[Category: Thebaine]]
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Current revision

Thebaine 6-O-demethylase (T6ODM) from Papaver somniferum in complex with 2-oxoglutarate

PDB ID 5o9w

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