6yxf

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(New page: '''Unreleased structure''' The entry 6yxf is ON HOLD Authors: Healey, R.D., Basu, S., Humm, A.S., Leyrat, C., Dupeux, F., Pica, A., Granier, S., Marquez, J.A. Description: Cryogenic hu...)
Current revision (08:31, 17 October 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 6yxf is ON HOLD
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==Cryogenic human adiponectin receptor 2 (ADIPOR2) with Gd-DO3 ligand determined by Serial Crystallography (SSX) using CrystalDirect==
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<StructureSection load='6yxf' size='340' side='right'caption='[[6yxf]], [[Resolution|resolution]] 3.02&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6yxf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6YXF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6YXF FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.025&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DO3:10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE+1,4,7-TRIACETIC+ACID'>DO3</scene>, <scene name='pdbligand=GD:GADOLINIUM+ATOM'>GD</scene>, <scene name='pdbligand=OLA:OLEIC+ACID'>OLA</scene>, <scene name='pdbligand=OLB:(2S)-2,3-DIHYDROXYPROPYL+(9Z)-OCTADEC-9-ENOATE'>OLB</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6yxf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6yxf OCA], [https://pdbe.org/6yxf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6yxf RCSB], [https://www.ebi.ac.uk/pdbsum/6yxf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6yxf ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Membrane proteins are central to many pathophysiological processes, yet remain very difficult to analyze structurally. Moreover, high-throughput structure-based drug discovery has not yet been exploited for membrane proteins because of lack of automation. Here, we present a facile and versatile platform for in meso membrane protein crystallization, enabling rapid atomic structure determination at both cryogenic and room temperatures. We apply this approach to human integral membrane proteins, which allowed us to identify different conformational states of intramembrane enzyme-product complexes and analyze by molecular dynamics simulations the structural dynamics of the ADIPOR2 integral membrane protein. Finally, we demonstrate an automated pipeline combining high-throughput microcrystal soaking, automated laser-based harvesting, and serial crystallography, enabling screening of small-molecule libraries with membrane protein crystals grown in meso. This approach brings needed automation to this important class of drug targets and enables high-throughput structure-based ligand discovery with membrane proteins.
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Authors: Healey, R.D., Basu, S., Humm, A.S., Leyrat, C., Dupeux, F., Pica, A., Granier, S., Marquez, J.A.
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An automated platform for structural analysis of membrane proteins through serial crystallography.,Healey RD, Basu S, Humm AS, Leyrat C, Cong X, Golebiowski J, Dupeux F, Pica A, Granier S, Marquez JA Cell Rep Methods. 2021 Oct 25;1(6):None. doi: 10.1016/j.crmeth.2021.100102. PMID:34723237<ref>PMID:34723237</ref>
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Description: Cryogenic human adiponectin receptor 2 (ADIPOR2) with Gd-DO3 ligand determined by Serial Crystallography (SSX) using CrystalDirect
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Healey, R.D]]
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<div class="pdbe-citations 6yxf" style="background-color:#fffaf0;"></div>
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[[Category: Pica, A]]
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== References ==
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[[Category: Humm, A.S]]
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<references/>
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[[Category: Marquez, J.A]]
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__TOC__
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[[Category: Leyrat, C]]
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</StructureSection>
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[[Category: Dupeux, F]]
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[[Category: Homo sapiens]]
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[[Category: Basu, S]]
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[[Category: Large Structures]]
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[[Category: Granier, S]]
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[[Category: Basu S]]
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[[Category: Dupeux F]]
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[[Category: Granier S]]
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[[Category: Healey RD]]
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[[Category: Humm AS]]
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[[Category: Leyrat C]]
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[[Category: Marquez JA]]
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[[Category: Pica A]]

Current revision

Cryogenic human adiponectin receptor 2 (ADIPOR2) with Gd-DO3 ligand determined by Serial Crystallography (SSX) using CrystalDirect

PDB ID 6yxf

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