6j7p

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:05, 23 October 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6j7p' size='340' side='right'caption='[[6j7p]], [[Resolution|resolution]] 2.63&Aring;' scene=''>
<StructureSection load='6j7p' size='340' side='right'caption='[[6j7p]], [[Resolution|resolution]] 2.63&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6j7p]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6J7P OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6J7P FirstGlance]. <br>
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6J7P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6J7P FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.629&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6j7p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6j7p OCA], [http://pdbe.org/6j7p PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6j7p RCSB], [http://www.ebi.ac.uk/pdbsum/6j7p PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6j7p ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6j7p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6j7p OCA], [https://pdbe.org/6j7p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6j7p RCSB], [https://www.ebi.ac.uk/pdbsum/6j7p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6j7p ProSAT]</span></td></tr>
</table>
</table>
-
<div style="background-color:#fffaf0;">
 
-
== Publication Abstract from PubMed ==
 
-
Mycobacterium tuberculosis (Mtb) encodes an exceptionally large number of toxin-antitoxin (TA) systems, supporting the hypothesis that TA systems are involved in pathogenesis. We characterized the putative Mtb Rv1044-Rv1045 TA locus structurally and functionally, demonstrating that it constitutes a bona fide TA system but adopts a previously unobserved antitoxicity mechanism involving phosphorylation of the toxin. While Rv1045 encodes the guanylyltransferase TglT functioning as a toxin, Rv1044 encodes the novel atypical serine protein kinase TakA, which specifically phosphorylates the cognate toxin at residue S78, thereby neutralizing its toxicity. In contrast to previous predictions, we found that Rv1044-Rv1045 does not belong to the type IV TA family because TglT and TakA interact with each other as substrate and kinase, suggesting an unusual type of TA system. Protein homology analysis suggests that other COG5340-DUF1814 protein pairs, two highly associated but uncharacterized protein families widespread in prokaryotes, might share this unusual antitoxicity mechanism.
 
- 
-
Characterization of a toxin-antitoxin system in Mycobacterium tuberculosis suggests neutralization by phosphorylation as the antitoxicity mechanism.,Yu X, Gao X, Zhu K, Yin H, Mao X, Wojdyla JA, Qin B, Huang H, Wang M, Sun YC, Cui S Commun Biol. 2020 May 7;3(1):216. doi: 10.1038/s42003-020-0941-1. PMID:32382148<ref>PMID:32382148</ref>
 
- 
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
-
</div>
 
-
<div class="pdbe-citations 6j7p" style="background-color:#fffaf0;"></div>
 
-
== References ==
 
-
<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Cui, S]]
+
[[Category: Cui S]]
-
[[Category: Gao, X]]
+
[[Category: Gao X]]
-
[[Category: Wang, M]]
+
[[Category: Wang M]]
-
[[Category: Wojdyla, J A]]
+
[[Category: Wojdyla JA]]
-
[[Category: Yu, X]]
+
[[Category: Yu X]]
-
[[Category: Zhu, K]]
+
[[Category: Zhu K]]
-
[[Category: Guanylyltransferase]]
+
-
[[Category: Guanylyltransferase-like toxin]]
+
-
[[Category: Ta]]
+
-
[[Category: Toxin]]
+

Current revision

Crystal structure of toxin TglT (unusual type guanylyltransferase-like toxin, Rv1045) mutant E146Q co-expressed with TakA from Mycobacterium tuberculosis

PDB ID 6j7p

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools