6w98
From Proteopedia
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<StructureSection load='6w98' size='340' side='right'caption='[[6w98]], [[Resolution|resolution]] 2.90Å' scene=''> | <StructureSection load='6w98' size='340' side='right'caption='[[6w98]], [[Resolution|resolution]] 2.90Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'> | + | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6W98 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6W98 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6OU:[(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl]+(~{Z})-octadec-9-enoate'>6OU</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PNS:4-PHOSPHOPANTETHEINE'>PNS</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.9Å</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6OU:[(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl]+(~{Z})-octadec-9-enoate'>6OU</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PNS:4-PHOSPHOPANTETHEINE'>PNS</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6w98 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6w98 OCA], [https://pdbe.org/6w98 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6w98 RCSB], [https://www.ebi.ac.uk/pdbsum/6w98 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6w98 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| - | == Function == | ||
| - | [[http://www.uniprot.org/uniprot/ACP_ECOLI ACP_ECOLI]] Carrier of the growing fatty acid chain in fatty acid biosynthesis.[HAMAP-Rule:MF_01217] | ||
| - | <div style="background-color:#fffaf0;"> | ||
| - | == Publication Abstract from PubMed == | ||
| - | Mycobacterium tuberculosis causes tuberculosis, a disease that kills over 1 million people each year. Its cell envelope is a common antibiotic target and has a unique structure due, in part, to two lipidated polysaccharides-arabinogalactan and lipoarabinomannan. Arabinofuranosyltransferase D (AftD) is an essential enzyme involved in assembling these glycolipids. We present the 2.9-A resolution structure of M. abscessus AftD, determined by single-particle cryo-electron microscopy. AftD has a conserved GT-C glycosyltransferase fold and three carbohydrate-binding modules. Glycan array analysis shows that AftD binds complex arabinose glycans. Additionally, AftD is non-covalently complexed with an acyl carrier protein (ACP). 3.4- and 3.5-A structures of a mutant with impaired ACP binding reveal a conformational change, suggesting that ACP may regulate AftD function. Mutagenesis experiments using a conditional knockout constructed in M. smegmatis confirm the essentiality of the putative active site and the ACP binding for AftD function. | ||
| - | + | ==See Also== | |
| - | + | *[[Acyl carrier protein 3D structures|Acyl carrier protein 3D structures]] | |
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Archer | + | [[Category: Archer M]] |
| - | [[Category: Athayde | + | [[Category: Athayde D]] |
| - | [[Category: Brunton | + | [[Category: Brunton R]] |
| - | [[Category: Carragher | + | [[Category: Carragher B]] |
| - | [[Category: Catalao | + | [[Category: Catalao MJ]] |
| - | [[Category: Clarke | + | [[Category: Clarke OB]] |
| - | [[Category: Dandey | + | [[Category: Dandey VP]] |
| - | [[Category: Giacometti | + | [[Category: Giacometti SI]] |
| - | [[Category: Kloss | + | [[Category: Kloss B]] |
| - | [[Category: Lowary | + | [[Category: Lowary TL]] |
| - | [[Category: Mancia | + | [[Category: Mancia F]] |
| - | [[Category: Niederweis | + | [[Category: Niederweis M]] |
| - | [[Category: Pimentel | + | [[Category: Pimentel M]] |
| - | [[Category: Potter | + | [[Category: Potter CS]] |
| - | [[Category: Raczkowski | + | [[Category: Raczkowski AM]] |
| - | [[Category: Rodrigues | + | [[Category: Rodrigues J]] |
| - | [[Category: Rosario | + | [[Category: Rosario AL]] |
| - | [[Category: Tan | + | [[Category: Tan YZ]] |
| - | [[Category: Wei | + | [[Category: Wei H]] |
| - | [[Category: Zhang | + | [[Category: Zhang L]] |
| - | [[Category: Zheng | + | [[Category: Zheng RB]] |
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Current revision
Single-Particle Cryo-EM Structure of Arabinofuranosyltransferase AftD from Mycobacteria
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Categories: Large Structures | Archer M | Athayde D | Brunton R | Carragher B | Catalao MJ | Clarke OB | Dandey VP | Giacometti SI | Kloss B | Lowary TL | Mancia F | Niederweis M | Pimentel M | Potter CS | Raczkowski AM | Rodrigues J | Rosario AL | Tan YZ | Wei H | Zhang L | Zheng RB
