This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2z6n
From Proteopedia
(Difference between revisions)
(New page: 200px<br /> <applet load="2z6n" size="450" color="white" frame="true" align="right" spinBox="true" caption="2z6n, resolution 1.86Å" /> '''Crystal Structure o...) |
|||
| (15 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2z6n.gif|left|200px]]<br /> | ||
| - | <applet load="2z6n" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2z6n, resolution 1.86Å" /> | ||
| - | '''Crystal Structure of Carbonmonoxy Hemoglobin D from the Aldabra Giant Tortoise, Geochelone gigantea'''<br /> | ||
| - | == | + | ==Crystal Structure of Carbonmonoxy Hemoglobin D from the Aldabra Giant Tortoise, Geochelone gigantea== |
| - | + | <StructureSection load='2z6n' size='340' side='right'caption='[[2z6n]], [[Resolution|resolution]] 1.86Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | [[ | + | <table><tr><td colspan='2'>[[2z6n]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aldabrachelys_gigantea Aldabrachelys gigantea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z6N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Z6N FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.86Å</td></tr> |
| - | [[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CMO:CARBON+MONOXIDE'>CMO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2z6n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2z6n OCA], [https://pdbe.org/2z6n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2z6n RCSB], [https://www.ebi.ac.uk/pdbsum/2z6n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2z6n ProSAT]</span></td></tr> | |
| - | [ | + | </table> |
| - | [ | + | == Function == |
| - | + | [https://www.uniprot.org/uniprot/HBAD_ALDGI HBAD_ALDGI] Involved in oxygen transport from the lung to the various peripheral tissues.[UniProtKB:P07417] | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | [ | + | Check<jmol> |
| - | + | <jmolCheckbox> | |
| - | [ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z6/2z6n_consurf.spt"</scriptWhenChecked> |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| - | [[ | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [ | + | </jmolCheckbox> |
| - | [[ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2z6n ConSurf]. |
| - | [ | + | <div style="clear:both"></div> |
| - | + | ||
| - | + | ==See Also== | |
| + | *[[Hemoglobin 3D structures|Hemoglobin 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Aldabrachelys gigantea]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Hasegawa T]] | ||
| + | [[Category: Ishikawa K]] | ||
| + | [[Category: Kuwada T]] | ||
| + | [[Category: Sato I]] | ||
| + | [[Category: Shishikura F]] | ||
Current revision
Crystal Structure of Carbonmonoxy Hemoglobin D from the Aldabra Giant Tortoise, Geochelone gigantea
| |||||||||||
