6u07

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:17, 30 October 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='6u07' size='340' side='right'caption='[[6u07]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
<StructureSection load='6u07' size='340' side='right'caption='[[6u07]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6u07]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6U07 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6U07 FirstGlance]. <br>
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6U07 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6U07 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.76&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TRA@ ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), B2M, HDCMA22P ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6u07 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6u07 OCA], [http://pdbe.org/6u07 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6u07 RCSB], [http://www.ebi.ac.uk/pdbsum/6u07 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6u07 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6u07 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6u07 OCA], [https://pdbe.org/6u07 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6u07 RCSB], [https://www.ebi.ac.uk/pdbsum/6u07 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6u07 ProSAT]</span></td></tr>
</table>
</table>
-
<div style="background-color:#fffaf0;">
 
-
== Publication Abstract from PubMed ==
 
-
Recombinant T cell receptors (TCRs) can be used to redirect naive T cells to eliminate virally infected or cancerous cells; however, they are plagued by low stability and uneven expression. Here, we use molecular modeling to identify mutations in the TCR constant domains (Calpha/Cbeta) that increase the unfolding temperature of Calpha/Cbeta by 20 degrees C, improve the expression of four separate alpha/beta TCRs by 3- to 10-fold, and improve the assembly and stability of TCRs with poor intrinsic stability. The stabilizing mutations rescue the expression of TCRs destabilized through variable domain mutation. The improved stability and folding of the TCRs reduces glycosylation, perhaps through conformational stabilization that restricts access to N-linked glycosylation enzymes. The Calpha/Cbeta mutations enables antibody-like expression and assembly of well-behaved bispecific molecules that combine an anti-CD3 antibody with the stabilized TCR. These TCR/CD3 bispecifics can redirect T cells to kill tumor cells with target HLA/peptide on their surfaces in vitro.
 
-
Computational stabilization of T cell receptors allows pairing with antibodies to form bispecifics.,Froning K, Maguire J, Sereno A, Huang F, Chang S, Weichert K, Frommelt AJ, Dong J, Wu X, Austin H, Conner EM, Fitchett JR, Heng AR, Balasubramaniam D, Hilgers MT, Kuhlman B, Demarest SJ Nat Commun. 2020 May 11;11(1):2330. doi: 10.1038/s41467-020-16231-7. PMID:32393818<ref>PMID:32393818</ref>
+
==See Also==
-
 
+
*[[T-cell receptor 3D structures|T-cell receptor 3D structures]]
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
+
-
</div>
+
-
<div class="pdbe-citations 6u07" style="background-color:#fffaf0;"></div>
+
-
== References ==
+
-
<references/>
+
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Austin, H]]
+
[[Category: Austin H]]
-
[[Category: Balasubramaniam, D]]
+
[[Category: Balasubramaniam D]]
-
[[Category: Chang, S]]
+
[[Category: Chang S]]
-
[[Category: Conner, E M]]
+
[[Category: Conner EM]]
-
[[Category: Demarest, S J]]
+
[[Category: Demarest SJ]]
-
[[Category: Dong, J]]
+
[[Category: Dong J]]
-
[[Category: Fitchett, J R]]
+
[[Category: Fitchett JR]]
-
[[Category: Frommelt, A J]]
+
[[Category: Frommelt AJ]]
-
[[Category: Froning, K]]
+
[[Category: Froning K]]
-
[[Category: Heng, A R]]
+
[[Category: Heng AR]]
-
[[Category: Hilgers, M T]]
+
[[Category: Hilgers MT]]
-
[[Category: Huang, F]]
+
[[Category: Huang F]]
-
[[Category: Kuhlman, B]]
+
[[Category: Kuhlman B]]
-
[[Category: Maguire, J]]
+
[[Category: Maguire J]]
-
[[Category: Sereno, A]]
+
[[Category: Sereno A]]
-
[[Category: Weichert, K]]
+
[[Category: Weichert K]]
-
[[Category: Wu, X]]
+
[[Category: Wu X]]
-
[[Category: Immune system]]
+
-
[[Category: T cell receptor]]
+
-
[[Category: Tcr constant domain]]
+

Current revision

Computational Stabilization of T Cell Receptor Constant Domains

PDB ID 6u07

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools