This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5hkg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:44, 16 August 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5hkg' size='340' side='right'caption='[[5hkg]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
<StructureSection load='5hkg' size='340' side='right'caption='[[5hkg]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5hkg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HKG OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5HKG FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5hkg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HKG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5HKG FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=RAP:RAPAMYCIN+IMMUNOSUPPRESSANT+DRUG'>RAP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1c9h|1c9h]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=RAP:RAPAMYCIN+IMMUNOSUPPRESSANT+DRUG'>RAP</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">FKBP1B, FKBP12.6, FKBP1L, FKBP9, OTK4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5hkg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hkg OCA], [https://pdbe.org/5hkg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5hkg RCSB], [https://www.ebi.ac.uk/pdbsum/5hkg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5hkg ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptidylprolyl_isomerase Peptidylprolyl isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.2.1.8 5.2.1.8] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5hkg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hkg OCA], [http://pdbe.org/5hkg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5hkg RCSB], [http://www.ebi.ac.uk/pdbsum/5hkg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5hkg ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/FKB1B_HUMAN FKB1B_HUMAN]] Has the potential to contribute to the immunosuppressive and toxic effects of FK506 and rapamycin. PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
+
[https://www.uniprot.org/uniprot/FKB1B_HUMAN FKB1B_HUMAN] Has the potential to contribute to the immunosuppressive and toxic effects of FK506 and rapamycin. PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 21:
==See Also==
==See Also==
-
*[[FK506 binding protein|FK506 binding protein]]
+
*[[FKBP 3D structures|FKBP 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human]]
+
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Peptidylprolyl isomerase]]
+
[[Category: Bacchi M]]
-
[[Category: Bacchi, M]]
+
[[Category: Boutin JA]]
-
[[Category: Boutin, J A]]
+
[[Category: Chavas L]]
-
[[Category: Chavas, L]]
+
[[Category: Ferry G]]
-
[[Category: Ferry, G]]
+
[[Category: Fould B]]
-
[[Category: Fould, B]]
+
[[Category: Huet T]]
-
[[Category: Huet, T]]
+
[[Category: Jullian M]]
-
[[Category: Jullian, M]]
+
[[Category: Nosjean O]]
-
[[Category: Nosjean, O]]
+
[[Category: Puget K]]
-
[[Category: Puget, K]]
+
[[Category: Sirigu S]]
-
[[Category: Sirigu, S]]
+
[[Category: Vuillard L]]
-
[[Category: Vuillard, L]]
+
-
[[Category: Immunophilin]]
+
-
[[Category: Isomerase]]
+
-
[[Category: Refolding]]
+
-
[[Category: Synthetic protein]]
+

Current revision

Total chemical synthesis, refolding and crystallographic structure of a fully active immunophilin: calstabin 2 (FKBP12.6).

PDB ID 5hkg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools