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5i79

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Current revision (08:25, 23 August 2023) (edit) (undo)
 
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<StructureSection load='5i79' size='340' side='right'caption='[[5i79]], [[Resolution|resolution]] 2.35&Aring;' scene=''>
<StructureSection load='5i79' size='340' side='right'caption='[[5i79]], [[Resolution|resolution]] 2.35&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5i79]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/A._niger A. niger]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5I79 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5I79 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5i79]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_niger Aspergillus niger]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5I79 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5I79 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CTT:BETA-D-GLUCOPYRANOSYL-(1- 4)-BETA-D-GLUCOPYRANOSYL-(1- 4)-BETA-D-GLUCOPYRANOSYL-(1- 4)-BETA-D-GLUCOPYRANOSE'>CTT</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.35&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5i78|5i78]], [[5i77|5i77]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=PRD_900011:beta-cellotetraose'>PRD_900011</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">eg1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5061 A. niger])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5i79 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5i79 OCA], [https://pdbe.org/5i79 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5i79 RCSB], [https://www.ebi.ac.uk/pdbsum/5i79 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5i79 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5i79 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5i79 OCA], [http://pdbe.org/5i79 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5i79 RCSB], [http://www.ebi.ac.uk/pdbsum/5i79 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5i79 ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/EGLB_ASPNG EGLB_ASPNG] Has endoglucanase activity on substrates containing beta-1,4 glycosidic bonds, like in carboxymethylcellulose (CMC), hydroxyethylcellulose (HEC) and beta-glucan. Involved in the degradation of complex natural cellulosic substrates.<ref>PMID:16233124</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: A. niger]]
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[[Category: Aspergillus niger]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Chen, C C]]
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[[Category: Chen CC]]
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[[Category: Guo, R T]]
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[[Category: Guo RT]]
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[[Category: Li, Y J]]
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[[Category: Li YJ]]
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[[Category: Liu, W D]]
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[[Category: Liu WD]]
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[[Category: Yan, J J]]
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[[Category: Yan JJ]]
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[[Category: Zheng, Y Y]]
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[[Category: Zheng YY]]
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[[Category: Endoglucanase]]
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[[Category: Hydrolase]]
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[[Category: Substrate binding]]
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Current revision

Crystal structure of a beta-1,4-endoglucanase mutant from Aspergillus niger in complex with sugar

PDB ID 5i79

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OCA

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