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6ymf
From Proteopedia
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<StructureSection load='6ymf' size='340' side='right'caption='[[6ymf]], [[Resolution|resolution]] 1.63Å' scene=''> | <StructureSection load='6ymf' size='340' side='right'caption='[[6ymf]], [[Resolution|resolution]] 1.63Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[6ymf]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[6ymf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aphanothece_halophytica Aphanothece halophytica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6YMF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6YMF FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PLS:[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-SERINE'>PLS</scene | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.63Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PLS:[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-SERINE'>PLS</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ymf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ymf OCA], [https://pdbe.org/6ymf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ymf RCSB], [https://www.ebi.ac.uk/pdbsum/6ymf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ymf ProSAT]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/I7H6W6_APHHA I7H6W6_APHHA] Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.[HAMAP-Rule:MF_00051] |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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</div> | </div> | ||
<div class="pdbe-citations 6ymf" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 6ymf" style="background-color:#fffaf0;"></div> | ||
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| + | ==See Also== | ||
| + | *[[Serine hydroxymethyltransferase 3D structures|Serine hydroxymethyltransferase 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Aphanothece halophytica]] |
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[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Angelaccio | + | [[Category: Angelaccio S]] |
| - | [[Category: Contestabile | + | [[Category: Contestabile R]] |
| - | [[Category: Nogues | + | [[Category: Nogues I]] |
| - | [[Category: Ruszkowski | + | [[Category: Ruszkowski M]] |
| - | [[Category: Sekula | + | [[Category: Sekula B]] |
| - | [[Category: Tramonti | + | [[Category: Tramonti A]] |
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Current revision
Crystal structure of serine hydroxymethyltransferase from Aphanothece halophytica in the PLP-Serine external aldimine state
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