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| | <StructureSection load='2wcd' size='340' side='right'caption='[[2wcd]], [[Resolution|resolution]] 3.29Å' scene=''> | | <StructureSection load='2wcd' size='340' side='right'caption='[[2wcd]], [[Resolution|resolution]] 3.29Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[2wcd]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WCD OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2WCD FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[2wcd]] is a 24 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WCD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WCD FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EMC:ETHYL+MERCURY+ION'>EMC</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.29Å</td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1qoy|1qoy]]</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EMC:ETHYL+MERCURY+ION'>EMC</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2wcd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wcd OCA], [http://pdbe.org/2wcd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2wcd RCSB], [http://www.ebi.ac.uk/pdbsum/2wcd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2wcd ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wcd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wcd OCA], [https://pdbe.org/2wcd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wcd RCSB], [https://www.ebi.ac.uk/pdbsum/2wcd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wcd ProSAT]</span></td></tr> |
| | </table> | | </table> |
| | + | == Function == |
| | + | [https://www.uniprot.org/uniprot/HLYE_ECOLI HLYE_ECOLI] Toxin, which has some hemolytic activity towards mammalian cells. Acts by forming a pore-like structure upon contact with mammalian cells.<ref>PMID:14532000</ref> |
| | == Evolutionary Conservation == | | == Evolutionary Conservation == |
| | [[Image:Consurf_key_small.gif|200px|right]] | | [[Image:Consurf_key_small.gif|200px|right]] |
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| | ==See Also== | | ==See Also== |
| | *[[Hemolysin 3D structures|Hemolysin 3D structures]] | | *[[Hemolysin 3D structures|Hemolysin 3D structures]] |
| - | *[[Molecular Playground/ClyA|Molecular Playground/ClyA]] | |
| | == References == | | == References == |
| | <references/> | | <references/> |
| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Ecoli]] | + | [[Category: Escherichia coli K-12]] |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Ban, N]] | + | [[Category: Ban N]] |
| - | [[Category: Glockshuber, R]] | + | [[Category: Glockshuber R]] |
| - | [[Category: Grauschopf, U]] | + | [[Category: Grauschopf U]] |
| - | [[Category: Maier, T]] | + | [[Category: Maier T]] |
| - | [[Category: Mueller, M]] | + | [[Category: Mueller M]] |
| - | [[Category: Cytolysis]]
| + | |
| - | [[Category: Cytolytic protein]]
| + | |
| - | [[Category: Disulfide bond]]
| + | |
| - | [[Category: Hemolysis]]
| + | |
| - | [[Category: Membrane]]
| + | |
| - | [[Category: Periplasm]]
| + | |
| - | [[Category: Pore-forming toxin]]
| + | |
| - | [[Category: Secreted]]
| + | |
| - | [[Category: Toxin]]
| + | |
| - | [[Category: Transmembrane]]
| + | |
| - | [[Category: Transmembrane pore]]
| + | |
| Structural highlights
Function
HLYE_ECOLI Toxin, which has some hemolytic activity towards mammalian cells. Acts by forming a pore-like structure upon contact with mammalian cells.[1]
Evolutionary Conservation
Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
Publication Abstract from PubMed
Pore-forming toxins (PFTs) are a class of potent virulence factors that convert from a soluble form to a membrane-integrated pore. They exhibit their toxic effect either by destruction of the membrane permeability barrier or by delivery of toxic components through the pores. Among the group of bacterial PFTs are some of the most dangerous toxins, such as diphtheria and anthrax toxin. Examples of eukaryotic PFTs are perforin and the membrane-attack complex, proteins of the immune system. PFTs can be subdivided into two classes, alpha-PFTs and beta-PFTs, depending on the suspected mode of membrane integration, either by alpha-helical or beta-sheet elements. The only high-resolution structure of a transmembrane PFT pore is available for a beta-PFT--alpha-haemolysin from Staphylococcus aureus. Cytolysin A (ClyA, also known as HlyE), an alpha-PFT, is a cytolytic -helical toxin responsible for the haemolytic phenotype of several Escherichia coli and Salmonella enterica strains. ClyA is cytotoxic towards cultured mammalian cells, induces apoptosis of macrophages and promotes tissue pervasion. Electron microscopic reconstructions demonstrated that the soluble monomer of ClyA must undergo large conformational changes to form the transmembrane pore. Here we report the 3.3 A crystal structure of the 400 kDa dodecameric transmembrane pore formed by ClyA. The tertiary structure of ClyA protomers in the pore is substantially different from that in the soluble monomer. The conversion involves more than half of all residues. It results in large rearrangements, up to 140 A, of parts of the monomer, reorganization of the hydrophobic core, and transitions of -sheets and loop regions to -helices. The large extent of interdependent conformational changes indicates a sequential mechanism for membrane insertion and pore formation.
The structure of a cytolytic alpha-helical toxin pore reveals its assembly mechanism.,Mueller M, Grauschopf U, Maier T, Glockshuber R, Ban N Nature. 2009 Jun 4;459(7247):726-30. PMID:19421192[2]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Wai SN, Lindmark B, Soderblom T, Takade A, Westermark M, Oscarsson J, Jass J, Richter-Dahlfors A, Mizunoe Y, Uhlin BE. Vesicle-mediated export and assembly of pore-forming oligomers of the enterobacterial ClyA cytotoxin. Cell. 2003 Oct 3;115(1):25-35. PMID:14532000
- ↑ Mueller M, Grauschopf U, Maier T, Glockshuber R, Ban N. The structure of a cytolytic alpha-helical toxin pore reveals its assembly mechanism. Nature. 2009 Jun 4;459(7247):726-30. PMID:19421192 doi:10.1038/nature08026
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