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| <StructureSection load='2wcv' size='340' side='right'caption='[[2wcv]], [[Resolution|resolution]] 1.90Å' scene=''> | | <StructureSection load='2wcv' size='340' side='right'caption='[[2wcv]], [[Resolution|resolution]] 1.90Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[2wcv]] is a 10 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WCV OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2WCV FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[2wcv]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WCV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WCV FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2wcu|2wcu]]</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2wcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wcv OCA], [http://pdbe.org/2wcv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2wcv RCSB], [http://www.ebi.ac.uk/pdbsum/2wcv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2wcv ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wcv OCA], [https://pdbe.org/2wcv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wcv RCSB], [https://www.ebi.ac.uk/pdbsum/2wcv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wcv ProSAT]</span></td></tr> |
| </table> | | </table> |
| == Function == | | == Function == |
- | [[http://www.uniprot.org/uniprot/FUCM_ECOHS FUCM_ECOHS]] Involved in the anomeric conversion of L-fucose (By similarity). | + | [https://www.uniprot.org/uniprot/FUCM_ECOLI FUCM_ECOLI] Involved in the anomeric conversion of L-fucose. Catalyzes also the interconversion of beta-pyran and beta-furan forms of D-ribose.<ref>PMID:15060078</ref> <ref>PMID:19524593</ref> |
| == Evolutionary Conservation == | | == Evolutionary Conservation == |
| [[Image:Consurf_key_small.gif|200px|right]] | | [[Image:Consurf_key_small.gif|200px|right]] |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Bacillus coli migula 1895]] | + | [[Category: Escherichia coli]] |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Kim, M S]] | + | [[Category: Kim M-S]] |
- | [[Category: Ku, B]] | + | [[Category: Ku B]] |
- | [[Category: Lee, K H]] | + | [[Category: Lee K-H]] |
- | [[Category: Oh, B H]] | + | [[Category: Oh B-H]] |
- | [[Category: Song, Y L]] | + | [[Category: Song Y-L]] |
- | [[Category: Suh, H Y]] | + | [[Category: Suh H-Y]] |
- | [[Category: Fucose metabolism]]
| + | |
- | [[Category: Isomerase]]
| + | |
- | [[Category: Pyranase]]
| + | |
- | [[Category: Ribose]]
| + | |
| Structural highlights
Function
FUCM_ECOLI Involved in the anomeric conversion of L-fucose. Catalyzes also the interconversion of beta-pyran and beta-furan forms of D-ribose.[1] [2]
Evolutionary Conservation
Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
Publication Abstract from PubMed
Escherichia coli FucU (Fucose Unknown) is a dual fucose mutarotase and ribose pyranase, which shares 44% sequence identity with its human counterpart. Herein, we report the structures of E. coli FucU and mouse FucU bound to L-fucose and delineate the catalytic mechanisms underlying the interconversion between stereoisomers of fucose and ribose. E. coli FucU forms a decameric toroid with each active site formed by two adjacent subunits. While one subunit provides most of the fucose-interacting residues including a catalytic tyrosine residue, the other subunit provides a catalytic His-Asp dyad. This active-site feature is critical not only for the mutarotase activity toward L-fucose but also for the pyranase activity toward D-ribose. Structural and biochemical analyses pointed that mouse FucU assembles into four different oligomeric forms, among which the smallest homodimeric form is most abundant and would be the predominant species under physiological conditions. This homodimer has two fucose-binding sites that are devoid of the His-Asp dyad and catalytically inactive, indicating that the mutarotase and the pyranase activities appear dispensable in vertebrates. The defective assembly of the mouse FucU homodimer into the decameric form is due to an insertion of two residues at the N-terminal extreme, which is a common aspect of all the known vertebrate FucU proteins. Therefore, vertebrate FucU appears to serve for as yet unknown function through the quaternary structural alteration.
Crystal structures and enzyme mechanisms of a dual fucose mutarotase/ribose pyranase.,Lee KH, Ryu KS, Kim MS, Suh HY, Ku B, Song YL, Ko S, Lee W, Oh BH J Mol Biol. 2009 Aug 7;391(1):178-91. Epub 2009 Jun 11. PMID:19524593[3]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Ryu KS, Kim C, Kim I, Yoo S, Choi BS, Park C. NMR application probes a novel and ubiquitous family of enzymes that alter monosaccharide configuration. J Biol Chem. 2004 Jun 11;279(24):25544-8. Epub 2004 Apr 1. PMID:15060078 doi:http://dx.doi.org/10.1074/jbc.M402016200
- ↑ Lee KH, Ryu KS, Kim MS, Suh HY, Ku B, Song YL, Ko S, Lee W, Oh BH. Crystal structures and enzyme mechanisms of a dual fucose mutarotase/ribose pyranase. J Mol Biol. 2009 Aug 7;391(1):178-91. Epub 2009 Jun 11. PMID:19524593 doi:10.1016/j.jmb.2009.06.022
- ↑ Lee KH, Ryu KS, Kim MS, Suh HY, Ku B, Song YL, Ko S, Lee W, Oh BH. Crystal structures and enzyme mechanisms of a dual fucose mutarotase/ribose pyranase. J Mol Biol. 2009 Aug 7;391(1):178-91. Epub 2009 Jun 11. PMID:19524593 doi:10.1016/j.jmb.2009.06.022
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