Chemotaxis protein 3D structures
From Proteopedia
(Difference between revisions)
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{{#tree:id=OrganizedByTopic|openlevels=0| | {{#tree:id=OrganizedByTopic|openlevels=0| | ||
| - | *CheY | + | *CheY or response regulator receiver protein |
**[[6tg7]] - EcCheY – ''Escherichia coli''<br /> | **[[6tg7]] - EcCheY – ''Escherichia coli''<br /> | ||
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**[[2chy]] – StCheY - ''Salmonella typhimurium'' <br /> | **[[2chy]] – StCheY - ''Salmonella typhimurium'' <br /> | ||
**[[5hm6]] – CheY – ''Acinetobacter baumannii'' <br /> | **[[5hm6]] – CheY – ''Acinetobacter baumannii'' <br /> | ||
| + | **[[7x1k]] – CheY – ''Listeria monocytogenes'' <br /> | ||
| + | **[[6exr]] – CheY – ''Pyrococcus horikoshii''<br /> | ||
*''CheY complexes'' | *''CheY complexes'' | ||
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**[[4hns]] - VcCheY + BeF3 + Mg<br /> | **[[4hns]] - VcCheY + BeF3 + Mg<br /> | ||
**[[4lx8]] - VcCheY + Mg<br /> | **[[4lx8]] - VcCheY + Mg<br /> | ||
| - | **[[6ekg]], [[6ekh]] – | + | **[[6ekg]], [[6ekh]] – MmCheY + Mg – ''Methaococcus maripaludis''<br /> |
| + | **[[7od9]] – MmCheY + CheF C-terminal<br /> | ||
*Chey-like | *Chey-like | ||
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**[[3hm4]] – CheX – ''Desulfovibrio desulfuricans''<BR /> | **[[3hm4]] – CheX – ''Desulfovibrio desulfuricans''<BR /> | ||
**[[3hzh]] – CheX + Che-3 – ''Borrelia burgdorferi''<br /> | **[[3hzh]] – CheX + Che-3 – ''Borrelia burgdorferi''<br /> | ||
| + | **[[6vpw]] – CheX – ''Vibrio vulnificus''<br /> | ||
*CheC | *CheC | ||
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**[[1fwp]] – EcCheA – NMR<br /> | **[[1fwp]] – EcCheA – NMR<br /> | ||
| + | **[[8c5v]] – EcCheA + CheW – Cryo EM<br /> | ||
**[[6s1k]] – EcCheA + CheW + methyl-accepting Che 1 – Cryo EM<br /> | **[[6s1k]] – EcCheA + CheW + methyl-accepting Che 1 – Cryo EM<br /> | ||
**[[3ja6]] – EcCheA + CheW + methyl-accepting Che 2 – Cryo EM<br /> | **[[3ja6]] – EcCheA + CheW + methyl-accepting Che 2 – Cryo EM<br /> | ||
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**[[6mi6]] - TmCheA P4 domain + ADP analog<br / | **[[6mi6]] - TmCheA P4 domain + ADP analog<br / | ||
**[[1i5c]] - TmCheA P4 domain (mutant) + ADP<br /> | **[[1i5c]] - TmCheA P4 domain (mutant) + ADP<br /> | ||
| + | **[[8oyq]], [[8oyz]], [[8oz9]], [[8p3n]], [[8p3r]], [[8p59]], [[8pf2]] - TmCheA ATP-binding domain 355-540 + inhibitor<br /> | ||
**[[1tqg]] – TmCheA phosphotransferase domain<br /> | **[[1tqg]] – TmCheA phosphotransferase domain<br /> | ||
**[[2ld6]] – TmCheA HPT domain - NMR<BR /> | **[[2ld6]] – TmCheA HPT domain - NMR<BR /> | ||
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**[[3ur1]], [[4jpb]] – TmCheA + CheW + methyl-accepting Che<br /> | **[[3ur1]], [[4jpb]] – TmCheA + CheW + methyl-accepting Che<br /> | ||
**[[1i5n]] – StCheA P1 domain<br /> | **[[1i5n]] – StCheA P1 domain<br /> | ||
| + | **[[6y1y]] – CheA – ''Treponema denticola''<br /> | ||
*CheB | *CheB | ||
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**[[1k0s]] – TmCheW<br /> | **[[1k0s]] – TmCheW<br /> | ||
**[[2ho9]] – EcCheW - NMR<BR /> | **[[2ho9]] – EcCheW - NMR<BR /> | ||
| + | |||
| + | *PomA, PomB | ||
| + | |||
| + | **[[8brd]], [[8bri]] – VaPomA + flagellar motor protein – ''Vibrio alginolyticus'' – Cryo EM | ||
| + | **[[8zyv]], [[8zyw]] – VaPomA + PomB – Cryo EM | ||
| + | **[[8zyz]], [[8zz0]] – VaPomA + PomB (mutant) – Cryo EM | ||
| + | **[[9ijm]] – VaPomA + PomB + phenamil – Cryo EM | ||
*Aspartate chemotaxis receptor | *Aspartate chemotaxis receptor | ||
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**[[3b47]] – Mche periplasmic domain – ''Geobacter sulfurreducens''<BR /> | **[[3b47]] – Mche periplasmic domain – ''Geobacter sulfurreducens''<BR /> | ||
**[[6iop]] - VcMche LBD <br /> | **[[6iop]] - VcMche LBD <br /> | ||
| + | **[[8bsb]] - VcMche LBD + Lys<br /> | ||
| + | **[[8bsa]] - VcMche LBD + Arg<br /> | ||
**[[6ceq]] - VcMche PAS 2 domain <br /> | **[[6ceq]] - VcMche PAS 2 domain <br /> | ||
**[[6dtm]], [[6e09]], [[6e0a]] – HpMche Tlpa LBD <br /> | **[[6dtm]], [[6e09]], [[6e0a]] – HpMche Tlpa LBD <br /> | ||
**[[6mni]] - Mche cache domain 28-293 – ''Pseudomonas syringae''<br /> | **[[6mni]] - Mche cache domain 28-293 – ''Pseudomonas syringae''<br /> | ||
**[[6pzj]] - Mche N-terminal domain 43-304 – ''Leptospira interrogans''<br /> | **[[6pzj]] - Mche N-terminal domain 43-304 – ''Leptospira interrogans''<br /> | ||
| - | + | **[[7w0w]] - Mche – ''Bacillus velezensis'' <br /> | |
*Methyl-accepting chemotaxis protein complex | *Methyl-accepting chemotaxis protein complex | ||
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**[[5t7m]], [[5t65]], [[5ltx]], [[5lto]], [[5lt9]] - PaMche LBD + amino acid – ''Pseudomonas aeruginosa''<br /> | **[[5t7m]], [[5t65]], [[5ltx]], [[5lto]], [[5lt9]] - PaMche LBD + amino acid – ''Pseudomonas aeruginosa''<br /> | ||
**[[5ltv]] - PaMche LBD + GABA<br /> | **[[5ltv]] - PaMche LBD + GABA<br /> | ||
| - | **[[6f9g]] - | + | **[[6f9g]] - PpMche LBD + putrescine – ''Pseudomonas putida''<br /> |
| + | **[[8bmv]] - PpMche LBD + uric acid<br /> | ||
**[[5zoh]] - Mche + biliverdin - Nostoc<br /> | **[[5zoh]] - Mche + biliverdin - Nostoc<br /> | ||
**[[6w3o]], [[6w3r]], [[6w3p]], [[6w3s]] - CjMche LBD + Leu derivative – ''Campylobacter jejuni''<br /> | **[[6w3o]], [[6w3r]], [[6w3p]], [[6w3s]] - CjMche LBD + Leu derivative – ''Campylobacter jejuni''<br /> | ||
**[[6w3t]], [[6w3x]] - CjMche LBD + Val derivative <br /> | **[[6w3t]], [[6w3x]] - CjMche LBD + Val derivative <br /> | ||
**[[6w3v]], [[6w3y]] - CjMche LBD + amino acid <br /> | **[[6w3v]], [[6w3y]] - CjMche LBD + amino acid <br /> | ||
| + | **[[7psg]] - Mche LBD + betaine – ''Pectobacterium atrosepticum''<br /> | ||
| + | **[[6d8v]] - SmMche X 38-306 – ''Sinorhizobium meliloti''<br /> | ||
| + | **[[8f7n]] - SmMche LBD 39-424 + Yb<br /> | ||
| + | **[[8fyv]], [[8vl8]] – MChe + Ser - ''Salmonella enterica''<br /> | ||
*''Heme-containing methyl-accepting chemotaxis protein'' | *''Heme-containing methyl-accepting chemotaxis protein'' | ||
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**[[1yab]] – TmFLIN<BR /> | **[[1yab]] – TmFLIN<BR /> | ||
| - | *Chemotaxis protein MotB or motility protein B | + | *Chemotaxis protein MotB or motility protein B, MotA |
**[[3cyp]], [[3imp]], [[3s02]], [[3s03]], [[3s06]], [[3s0h]], [[3s0w]], [[3s0y]] – HpMotB C terminal<br /> | **[[3cyp]], [[3imp]], [[3s02]], [[3s03]], [[3s06]], [[3s0h]], [[3s0w]], [[3s0y]] – HpMotB C terminal<br /> | ||
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**[[5y3z]], [[5y40]] – StMotB periplasmic domain (mutant) <br /> | **[[5y3z]], [[5y40]] – StMotB periplasmic domain (mutant) <br /> | ||
**[[2zov]], [[2zvy]], [[2zvz]] - StMotB C terminal<br /> | **[[2zov]], [[2zvy]], [[2zvz]] - StMotB C terminal<br /> | ||
| + | **[[6ysl]] – BsMotB + MotA – Cryo EM<br /> | ||
| + | **[[6ykm]] – CjMotB + MotA – Cryo EM<br /> | ||
| + | **[[8gqy]] – MotA – ''Aquifex aeolicus'' - Cryo EM<br /> | ||
| + | |||
*Chemotaxis protein CKI | *Chemotaxis protein CKI | ||
Current revision
3D structures of chemotaxis protein
Updated on 27-January-2025
