6xkk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "6xkk" [edit=sysop:move=sysop])
Current revision (14:50, 6 March 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6xkk is ON HOLD
+
==Cryo-EM structure of the NLRP1-CARD filament==
-
 
+
<StructureSection load='6xkk' size='340' side='right'caption='[[6xkk]], [[Resolution|resolution]] 3.60&Aring;' scene=''>
-
Authors: Hollingsworth, L.R., David, L., Li, Y., Sharif, H., Fontana, P., Fu, T., Wu, H.
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[6xkk]] is a 44 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6XKK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6XKK FirstGlance]. <br>
-
Description: Cryo-EM structure of the NLRP1-CARD filament
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.6&#8491;</td></tr>
-
[[Category: Unreleased Structures]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6xkk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6xkk OCA], [https://pdbe.org/6xkk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6xkk RCSB], [https://www.ebi.ac.uk/pdbsum/6xkk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6xkk ProSAT]</span></td></tr>
-
[[Category: Fontana, P]]
+
</table>
-
[[Category: Fu, T]]
+
== Disease ==
-
[[Category: Sharif, H]]
+
[https://www.uniprot.org/uniprot/NLRP1_HUMAN NLRP1_HUMAN] Vitiligo-associated autoimmune disease;Vitiligo;Corneal intraepithelial dyskeratosis with palmoplantar hyperkeratosis and laryngeal dyskeratosis. Disease susceptibility is associated with variations affecting the gene represented in this entry. The disease is caused by mutations affecting the gene represented in this entry. The disease may be caused by mutations affecting the gene represented in this entry.
-
[[Category: Li, Y]]
+
== Function ==
-
[[Category: Hollingsworth, L.R]]
+
[https://www.uniprot.org/uniprot/NLRP1_HUMAN NLRP1_HUMAN] As the sensor component of the NLRP1 inflammasome, plays a crucial role in innate immunity and inflammation. In response to pathogens and other damage-associated signals, initiates the formation of the inflammasome polymeric complex, made of NLRP1, CASP1, and possibly PYCARD. Recruitment of proCASP1 to the inflammasome promotes its activation and CASP1-catalyzed IL1B and IL18 maturation and secretion in the extracellular milieu. Activation of NLRP1 inflammasome is also required for HMGB1 secretion. The active cytokines and HMGB1 stimulate inflammatory responses. Inflammasomes can also induce pyroptosis, an inflammatory form of programmed cell death (PubMed:22665479, PubMed:17418785). May be activated by muramyl dipeptide (MDP), a fragment of bacterial peptidoglycan, in a NOD2-dependent manner (PubMed:18511561). Contrary to its mouse ortholog, not activated by Bacillus anthracis lethal toxin (PubMed:19651869). It is unclear whether isoform 2 is involved in inflammasome formation. It is not cleaved within the FIIND domain, does not assemble into specks, nor promote IL1B release (PubMed:22665479). However, in an vitro cell-free system, it has been shown to be activated by MDP (PubMed:17349957). Binds ATP (PubMed:11113115, PubMed:15212762).[UniProtKB:A1Z198]<ref>PMID:11113115</ref> <ref>PMID:15212762</ref> <ref>PMID:17349957</ref> <ref>PMID:17418785</ref> <ref>PMID:18511561</ref> <ref>PMID:19651869</ref> <ref>PMID:22665479</ref> <ref>PMID:27662089</ref>
-
[[Category: David, L]]
+
== References ==
-
[[Category: Wu, H]]
+
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Homo sapiens]]
 +
[[Category: Large Structures]]
 +
[[Category: David L]]
 +
[[Category: Fontana P]]
 +
[[Category: Fu T]]
 +
[[Category: Hollingsworth LR]]
 +
[[Category: Li Y]]
 +
[[Category: Sharif H]]
 +
[[Category: Wu H]]

Current revision

Cryo-EM structure of the NLRP1-CARD filament

PDB ID 6xkk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools