6xmg
From Proteopedia
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| - | '''Unreleased structure''' | ||
| - | + | ==Cryo-EM structure of Cas12g ternary complex== | |
| + | <StructureSection load='6xmg' size='340' side='right'caption='[[6xmg]], [[Resolution|resolution]] 4.80Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[6xmg]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Metagenome Metagenome]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6XMG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6XMG FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4.8Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6xmg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6xmg OCA], [https://pdbe.org/6xmg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6xmg RCSB], [https://www.ebi.ac.uk/pdbsum/6xmg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6xmg ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Cas12g, the type V-G CRISPR-Cas effector, is an RNA-guided ribonuclease that targets single-stranded RNA substrate. The CRISPR-Cas12g system offers a potential platform for transcriptome engineering and diagnostic applications. We determined the structures of Cas12g-guide RNA complexes in the absence and presence of target RNA by cryo-EM to a resolution of 3.1 A and 4.8 A, respectively. Cas12g adopts a bilobed structure with miniature REC2 and Nuc domains, whereas the guide RNAs fold into a flipped 'F' shape, which is primarily recognized by the REC lobe. Target RNA and the CRISPR RNA (crRNA) guide form a duplex that inserts into the central cavity between the REC and NUC lobes, inducing conformational changes in both lobes to activate Cas12g. The structural insights would facilitate the development of Cas12g-based applications. | ||
| - | + | Cryo-EM structure of the RNA-guided ribonuclease Cas12g.,Li Z, Zhang H, Xiao R, Han R, Chang L Nat Chem Biol. 2021 Apr;17(4):387-393. doi: 10.1038/s41589-020-00721-2. Epub 2021 , Jan 25. PMID:33495647<ref>PMID:33495647</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| - | [[Category: | + | <div class="pdbe-citations 6xmg" style="background-color:#fffaf0;"></div> |
| - | [[Category: Chang | + | == References == |
| - | [[Category: Li | + | <references/> |
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Metagenome]] | ||
| + | [[Category: Chang L]] | ||
| + | [[Category: Li Z]] | ||
| + | [[Category: Zhang H]] | ||
Current revision
Cryo-EM structure of Cas12g ternary complex
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Categories: Large Structures | Metagenome | Chang L | Li Z | Zhang H
