2x72

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:25, 20 December 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='2x72' size='340' side='right'caption='[[2x72]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
<StructureSection load='2x72' size='340' side='right'caption='[[2x72]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2x72]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bovin Bovin]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X72 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2X72 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2x72]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X72 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2X72 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene>, <scene name='pdbligand=LPP:2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL+HEXADECANOATE'>LPP</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PEF:DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE'>PEF</scene>, <scene name='pdbligand=PLM:PALMITIC+ACID'>PLM</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene>, <scene name='pdbligand=LPP:2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL+HEXADECANOATE'>LPP</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PEF:DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE'>PEF</scene>, <scene name='pdbligand=PLM:PALMITIC+ACID'>PLM</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ov0|1ov0]], [[1aqg|1aqg]], [[1n3m|1n3m]], [[2i37|2i37]], [[1bok|1bok]], [[2i36|2i36]], [[1lvz|1lvz]], [[1tag|1tag]], [[1edx|1edx]], [[2j4y|2j4y]], [[1fqk|1fqk]], [[1tnd|1tnd]], [[1vqx|1vqx]], [[1ln6|1ln6]], [[1jfp|1jfp]], [[1ov1|1ov1]], [[1f88|1f88]], [[1boj|1boj]], [[1eds|1eds]], [[1nzs|1nzs]], [[1u19|1u19]], [[1fqj|1fqj]], [[1tad|1tad]], [[1fdf|1fdf]], [[1edw|1edw]], [[1hzx|1hzx]], [[1l9h|1l9h]], [[2i35|2i35]], [[1gzm|1gzm]], [[1edv|1edv]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2x72 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2x72 OCA], [https://pdbe.org/2x72 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2x72 RCSB], [https://www.ebi.ac.uk/pdbsum/2x72 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2x72 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2x72 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2x72 OCA], [http://pdbe.org/2x72 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2x72 RCSB], [http://www.ebi.ac.uk/pdbsum/2x72 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2x72 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/GNAT1_BOVIN GNAT1_BOVIN]] Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. Transducin is an amplifier and one of the transducers of a visual impulse that performs the coupling between rhodopsin and cGMP-phosphodiesterase.
+
[https://www.uniprot.org/uniprot/OPSD_BOVIN OPSD_BOVIN] Photoreceptor required for image-forming vision at low light intensity. Required for photoreceptor cell viability after birth. Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change leading to G-protein activation and release of all-trans retinal (By similarity).<ref>PMID:16908857</ref> <ref>PMID:17060607</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 27: Line 26:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bovin]]
+
[[Category: Bos taurus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Dantona, A]]
+
[[Category: Dantona A]]
-
[[Category: Edwards, P C]]
+
[[Category: Edwards PC]]
-
[[Category: Fransen, M]]
+
[[Category: Fransen M]]
-
[[Category: Oprian, D D]]
+
[[Category: Oprian DD]]
-
[[Category: Schertler, G F.X]]
+
[[Category: Schertler GFX]]
-
[[Category: Standfuss, J]]
+
[[Category: Standfuss J]]
-
[[Category: Xie, G]]
+
[[Category: Xie G]]
-
[[Category: Chromophore]]
+
-
[[Category: G-protein coupled receptor]]
+
-
[[Category: Glycoprotein]]
+
-
[[Category: Lipoprotein]]
+
-
[[Category: Photoreceptor protein]]
+
-
[[Category: Retinal protein]]
+
-
[[Category: Sensory transduction]]
+
-
[[Category: Signaling protein]]
+
-
[[Category: Transmembrane]]
+

Current revision

CRYSTAL STRUCTURE OF THE CONSTITUTIVELY ACTIVE E113Q,D2C,D282C RHODOPSIN MUTANT WITH BOUND GALPHACT PEPTIDE.

PDB ID 2x72

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools