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| | <StructureSection load='2xlf' size='340' side='right'caption='[[2xlf]], [[Resolution|resolution]] 2.30Å' scene=''> | | <StructureSection load='2xlf' size='340' side='right'caption='[[2xlf]], [[Resolution|resolution]] 2.30Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[2xlf]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Aphanocapsa_sp._(strain_n-1) Aphanocapsa sp. (strain n-1)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XLF OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2XLF FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[2xlf]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechocystis_sp._PCC_6803 Synechocystis sp. PCC 6803]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XLF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XLF FirstGlance]. <br> |
| - | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2xl7|2xl7]], [[2xl9|2xl9]], [[2xlg|2xlg]], [[2xla|2xla]]</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2xlf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xlf OCA], [http://pdbe.org/2xlf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2xlf RCSB], [http://www.ebi.ac.uk/pdbsum/2xlf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2xlf ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xlf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xlf OCA], [https://pdbe.org/2xlf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xlf RCSB], [https://www.ebi.ac.uk/pdbsum/2xlf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xlf ProSAT]</span></td></tr> |
| | </table> | | </table> |
| | + | == Function == |
| | + | [https://www.uniprot.org/uniprot/P73600_SYNY3 P73600_SYNY3] |
| | == Evolutionary Conservation == | | == Evolutionary Conservation == |
| | [[Image:Consurf_key_small.gif|200px|right]] | | [[Image:Consurf_key_small.gif|200px|right]] |
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| | </StructureSection> | | </StructureSection> |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Dainty, S J]] | + | [[Category: Synechocystis sp. PCC 6803]] |
| - | [[Category: Firbank, S J]] | + | [[Category: Dainty SJ]] |
| - | [[Category: Perez-Rama, M]] | + | [[Category: Firbank SJ]] |
| - | [[Category: Robinson, N J]] | + | [[Category: Perez-Rama M]] |
| - | [[Category: Tottey, S]] | + | [[Category: Robinson NJ]] |
| - | [[Category: Waldron, K J]] | + | [[Category: Tottey S]] |
| - | [[Category: Cupin]]
| + | [[Category: Waldron KJ]] |
| - | [[Category: Metal binding protein]]
| + | |
| Structural highlights
Function
P73600_SYNY3
Evolutionary Conservation
Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
Publication Abstract from PubMed
A copper-trafficking pathway was found to enable Cu(2+) occupancy of a soluble periplasm protein, CucA, even when competing Zn(2+) is abundant in the periplasm. Here, we solved the structure of CucA (a new cupin) and found that binding of Cu(2+), but not Zn(2+), quenches the fluorescence of Trp(165), which is adjacent to the metal site. Using this fluorescence probe, we established that CucA becomes partly occupied by Zn(2+) following exposure to equimolar Zn(2+) and Cu(2+). Cu(2+)-CucA is more thermodynamically stable than Zn(2+)-CucA but k((Zn-->Cu)exchange) is slow, raising questions about how the periplasm contains solely the Cu(2+) form. We discovered that a copper-trafficking pathway involving two copper transporters (CtaA and PacS) and a metallochaperone (Atx1) is obligatory for Cu(2+)-CucA to accumulate in the periplasm. There was negligible CucA protein in the periplasm of DeltactaA cells, but the abundance of cucA transcripts was unaltered. Crucially, DeltactaA cells overaccumulate low M(r) copper complexes in the periplasm, and purified apoCucA can readily acquire Cu(2+) from DeltactaA periplasm extracts, but in vivo apoCucA fails to come into contact with these periplasmic copper pools. Instead, copper traffics via a cytoplasmic pathway that is coupled to CucA translocation to the periplasm.
Structure and metal loading of a soluble periplasm cuproprotein.,Waldron KJ, Firbank SJ, Dainty SJ, Perez-Rama M, Tottey S, Robinson NJ J Biol Chem. 2010 Oct 15;285(42):32504-11. Epub 2010 Aug 10. PMID:20702411[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Waldron KJ, Firbank SJ, Dainty SJ, Perez-Rama M, Tottey S, Robinson NJ. Structure and metal loading of a soluble periplasm cuproprotein. J Biol Chem. 2010 Oct 15;285(42):32504-11. Epub 2010 Aug 10. PMID:20702411 doi:10.1074/jbc.M110.153080
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