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| <StructureSection load='2xll' size='340' side='right'caption='[[2xll]], [[Resolution|resolution]] 2.31Å' scene=''> | | <StructureSection load='2xll' size='340' side='right'caption='[[2xll]], [[Resolution|resolution]] 2.31Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[2xll]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Myrothecium_verrucaria Myrothecium verrucaria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XLL OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2XLL FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[2xll]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Albifimbria_verrucaria Albifimbria verrucaria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XLL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XLL FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.305Å</td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Bilirubin_oxidase Bilirubin oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.3.5 1.3.3.5] </span></td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2xll FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xll OCA], [http://pdbe.org/2xll PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2xll RCSB], [http://www.ebi.ac.uk/pdbsum/2xll PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2xll ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xll FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xll OCA], [https://pdbe.org/2xll PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xll RCSB], [https://www.ebi.ac.uk/pdbsum/2xll PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xll ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/BLRO_ALBVE BLRO_ALBVE] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Bilirubin oxidase]] | + | [[Category: Albifimbria verrucaria]] |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Myrothecium verrucaria]]
| + | [[Category: Blanford CF]] |
- | [[Category: Blanford, C F]] | + | [[Category: Cracknell JA]] |
- | [[Category: Cracknell, J A]] | + | [[Category: Lowe ED]] |
- | [[Category: Lowe, E D]] | + | [[Category: McNamara TP]] |
- | [[Category: McNamara, T P]] | + | |
- | [[Category: Ascomycete]]
| + | |
- | [[Category: Blue multicopper oxidase]]
| + | |
- | [[Category: Dioxygen reduction]]
| + | |
- | [[Category: Glycoprotein]]
| + | |
- | [[Category: Heme catabolism]]
| + | |
- | [[Category: Laccase]]
| + | |
- | [[Category: Oxidoreductase]]
| + | |
- | [[Category: Protein film voltammetry]]
| + | |
| Structural highlights
Function
BLRO_ALBVE
Publication Abstract from PubMed
The blue multi-copper oxidase bilirubin oxidase (BOx) from the ascomycete plant pathogen Myrothecium verrucaria (Mv) efficiently catalyses the oxidation of bilirubin to biliverdin, with the concomitant reduction of O(2) to water, a reaction of considerable interest for low-temperature bio-fuel cell applications. We have solved the complete X-ray determined structure of Mv BOx at 2.4 A resolution, using molecular replacement with the Spore Coat Protein A (CotA) enzyme from Bacillus subtilis (PDB code ) as a template. The structure reveals an unusual environment around the blue type 1 copper (T1 Cu) that includes two non-coordinating hydrophilic amino acids, asparagine and threonine. The presence of a long, narrow and hydrophilic pocket near the T1 Cu suggests that structure of the substrate-binding site is dynamically determined in vivo. We show that the interaction between the binding pocket of Mv BOx and its highly conjugated natural organic substrate, bilirubin, can be used to stabilise the enzyme on a pyrolytic graphite electrode, more than doubling its electrocatalytic activity relative to the current obtained by simple adsorption of the protein to the carbon surface.
Bilirubin oxidase from Myrothecium verrucaria: X-ray determination of the complete crystal structure and a rational surface modification for enhanced electrocatalytic O(2) reduction.,Cracknell JA, McNamara TP, Lowe ED, Blanford CF Dalton Trans. 2011 May 5. PMID:21544308[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Cracknell JA, McNamara TP, Lowe ED, Blanford CF. Bilirubin oxidase from Myrothecium verrucaria: X-ray determination of the complete crystal structure and a rational surface modification for enhanced electrocatalytic O(2) reduction. Dalton Trans. 2011 May 5. PMID:21544308 doi:10.1039/c0dt01403f
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